Query= MSMg01no476_l06.b1 MSMg01no476_l06.b1 CHROMAT_FILE:
MSMg01no476_l06.b1 PHD_FILE: MSMg01no476_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:53 2005
(440 letters)
>mm_chr9_79295882_79296721
Length = 840
Score = 775 bits (401), Expect = 0.0
Identities = 430/445 (96%), Gaps = 10/445 (2%)
Strand = Plus / Plus
Query: 1 tccttcggtaattaacagtgaagtggattcataagccaaataaactctttccttttgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccttcggtaattaacagtgaagtggattcataagccaaataaactctttccttttgctt 260
Query: 61 ttggtcatagtgccttaacacaaagcagtcctaacactcggtgtaaaactgagtgatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggtcatagtgccttaacacaaagcagtcctaacactcggtgtaaaactgagtgatcct 320
Query: 121 ttaataaagaaacaaaggatcacagaatcctttatttctttctcatttctactttaatca 180
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 321 ttaataaagaaacaaaggatcacagaatcttttatttctttctcatttccactttaatca 380
Query: 181 gtaacaaacttctaacctgccttccctcacatacactgagcatttgtagttctttctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaacaaacttctaacctgccttccctcacatacactgagcatttgtagttctttctctt 440
Query: 241 tgaaaaataattgtt-----ttttttggatggtattgcagtagtacaatgttaaccatgt 295
||||||||||||||| | ||||||||||| ||||||||||||||||||||||
Sbjct: 441 tgaaaaataattgttaacact-----ggatggtattgtagtagtacaatgttaaccatgt 495
Query: 296 cacaggaataaattacagaaataagagaaactaaaaagagaaaaaaggcattgagatttg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cacaggaataaattacagaaataagagaaactaaaaagagaaaaaaggcattgagatttg 555
Query: 356 ttaaatttaattgtgtagtagtactcagagtagagggaaaagatgagttaatctgactca 415
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 556 ttaaatttaactgtgtagtagtactcagagtagagggaaaagatgagttaaactgactca 615
Query: 416 gtatttagaaaattatcattccatc 440
|||||||||||||||||||||||||
Sbjct: 616 gtatttagaaaattatcattccatc 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_l06.g1 MSMg01no476_l06.g1 CHROMAT_FILE:
MSMg01no476_l06.g1 PHD_FILE: MSMg01no476_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:53 2005
(244 letters)
>mm_chr9_79445464_79446106
Length = 643
Score = 426 bits (220), Expect = e-124
Identities = 238/244 (97%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 atttgtggtttggatgttccttgaaaagcccttgtatcaggagtgtgaagacgggtccct 60
|||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||
Sbjct: 443 atttgtggtttggatgttccttaaaaagcccttgtatcaggagtttgaagacgggtctct 384
Query: 61 gtgtcacgaactccgtggagtcacaaccacatgactctgaagcacaaagtcatgcctgac 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 383 gtgtcacgaactccgtggagtcacaaccacatgactttgaagcacaaagtcatgcctgac 324
Query: 121 tagacgcggtttggctcatggtgcttgtaatacactggctcaccactaccttctactttg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aagacgcggtttggctcatggtgcttgtaatacactggctcaccactaccttctactttg 264
Query: 181 ctctgggagaaaggactgggaaccaagccattccttagaacacatgtattttttttttaa 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 263 ctctgggagaaaggactgggaaccaagccattccttagaacacatgta-tttttttttaa 205
Query: 241 ttga 244
||||
Sbjct: 204 ttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
