CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACGCGGAT
TCTTAAAACTTATGACCCTGAGAGCTGAAGATTTGATGGTGGTAGATTCT
ATTACCTCCTCTGAACACATCCATAGACCCCCTGTCCATGCTCAGTTTCA
GTAGACTCTTTGGGAATGGATAACCCTGTATATAGGGTCAAGGCAGTGTG
GAAGGGGGCTGTTGCTGTTGGCTTGATCTGTAGAGGCAGCACTGGCTATG
GGGACAAGGAGGCCCAAACATTGGGTTGTGATCCTCAGTTGCTGAGGACC
TGGCCAGAAGGCAGAGTCTGGCGCAGAGCCTCCGGGGCTCTTGAGAGGAA
AGACCAGGCTAGTTTAGAAGCCAAACAATTTTCCTTTGTCTTACTTGTTT
TTCCTTCAAGATGCCAATGTTTTAGAAGCCACAGCAAGAGGGAAGTCAAG
GATGCTGGGCACTCAGGATTTGCGACTTGCAAACATACTGGCCAACATGA
TGGGCTGTCCACAGCTCTCCCCTTCCGCCTAGCTCTGGGACCAGGGGGTG
TAAAATTGGCCCGATTCTACATTCATTTCACACTCAGTCACTCTTCCTAG
CAGCAGAGTACCTCCTATCACTCTGCACACTCCCAGAGAGGAAATCAAAC
CTTTGTCAATAGTTTTAGAGGCCAAAAGCAAAATGGTGGTTTCCAGGCCG
CAGCTCCCTTGACTTGCTCCTCTGTGCCAGACCCTGTCAAGGGCAGGCAT
CCT

ACGATGATGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACAGACTGAAGCATCACGCACAGGGCC
TGCAAGGTTCTGCACCAGGTCCCCTGACTATATATTATGGATTTGGTGTT
TATATGTGGTTCTCTCATTCTTGTGCCTTCTCTTGAGCTCTTTTCCTTTA
GCTGATTTGTCTTGTCCAACTTTGATTTTATTGGTTTTGTTTTATTATTA
TAATTTATTTTTATATATTATATATTAATATATTATATATTTTATATACT
AATATATATTAATGAATAATTTTCTAGCACTAGGGTTAAGAATTGAATTG
TCACTTATTCCTTCTAGGAGAGGAAAAATCATTTCCTCTAACAGAGTAAC
ACTAGTTATACCAACCAGTCCAGGACAGTCCTTATATTCAGGAGTTGTTG
ACCAGCATATAATGGACTCCACAGTTATATGTGTGTGAGTGATAGAGACA
GTGTGTGTATGTGTGCATTGTTTTATTTTATTACACTTTGGTGTTTATTT
TGTGGGGGTGGATATTTTATTTTATTGGTTTGGNGGGGANNTNNCNNNNN
NNNNNTNNNTTTTTTTNNNTTTNNNCTNNTNNNNNTNTTTTTTTTNTNTT
TTTTTTTTTTTTTTTNNNTTCTTTTTTTTTCTTTTTTNTTTTTTTTTNNN
NNNNNTTTNTTTTTTTTTTTTTTTTTTTTTTTNNTNNCNCTCTCTTTTTT
TTTCTTTTTTTN

Query= MSMg01no477_h23.b1 MSMg01no477_h23.b1 CHROMAT_FILE:
MSMg01no477_h23.b1 PHD_FILE: MSMg01no477_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:57 2005
         (677 letters)



>mm_chr9_23119783_23120859
          Length = 1077

 Score = 1263 bits (653), Expect = 0.0
 Identities = 671/677 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attcttaaaacttatgaccctgagagctgaagatttgatggtggtagattctattacctc 60
           |||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcttaaaacttaggaaactgagagctgaagatttgatggtggtagattctattacctc 260

                                                                       
Query: 61  ctctgaacacatccatagaccccctgtccatgctcagtttcagtagactctttgggaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctgaacacatccatagaccccctgtccatgctcagtttcagtagactctttgggaatg 320

                                                                       
Query: 121 gataaccctgtatatagggtcaaggcagtgtggaagggggctgttgctgttggcttgatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gataaccctgtatatagggtcaaggcagtgtggaagggggctgttgctgttggcttgatc 380

                                                                       
Query: 181 tgtagaggcagcactggctatggggacaaggaggcccaaacattgggttgtgatcctcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtagaggcagcactggctatggggacaaggaggcccaaacattgggttgtgatcctcag 440

                                                                       
Query: 241 ttgctgaggacctggccagaaggcagagtctggcgcagagcctccggggctcttgagagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgctgaggacctggccagaaggcagagtctggcgcagagcctccggggctcttgagagg 500

                                                                       
Query: 301 aaagaccaggctagtttagaagccaaacaattttcctttgtcttacttgtttttccttca 360
           |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 501 aaagaccaggctagtttagaagccaaacaactttcctttgtcttatttgtttttccttca 560

                                                                       
Query: 361 agatgccaatgttttagaagccacagcaagagggaagtcaaggatgctgggcactcagga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatgccaatgttttagaagccacagcaagagggaagtcaaggatgctgggcactcagga 620

                                                                       
Query: 421 tttgcgacttgcaaacatactggccaacatgatgggctgtccacagctctccccttccgc 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgcaacttgcaaacatactggccaacatgatgggctgtccacagctctccccttccgc 680

                                                                       
Query: 481 ctagctctgggaccagggggtgtaaaattggcccgattctacattcatttcacactcagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctagctctgggaccagggggtgtaaaattggcccgattctacattcatttcacactcagt 740

                                                                       
Query: 541 cactcttcctagcagcagagtacctcctatcactctgcacactcccagagaggaaatcaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cactcttcctagcagcagagtacctcctatcactctgcacactcccagagaggaaatcaa 800

                                                                       
Query: 601 acctttgtcaatagttttagaggccaaaagcaaaatggtggtttccaggccgcagctccc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acctttgtcaatagttttagaggccaaaagcaaaatggtggtttccaggccgcagctccc 860

                            
Query: 661 ttgacttgctcctctgt 677
           |||||||||||||||||
Sbjct: 861 ttgacttgctcctctgt 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no477_h23.g1 MSMg01no477_h23.g1 CHROMAT_FILE:
MSMg01no477_h23.g1 PHD_FILE: MSMg01no477_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:57 2005
         (503 letters)



>mm_chr9_23343587_23344489
          Length = 903

 Score =  729 bits (377), Expect = 0.0
 Identities = 410/421 (97%)
 Strand = Plus / Minus

                                                                       
Query: 83  gtggttctctcattcttgtgccttctcttgagctcttttcctttagctgatttgtcttgt 142
           |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 871 gtggttctctcactcttgtgccttctcttgagctcttttccttttgctgatttgtctttt 812

                                                                       
Query: 143 ccaactttgattttattggttttgttttattattataatttatttttatatattatatat 202
           |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 811 ccaactttgattttattggttttgttttattattattatttattttgatatattatatat 752

                                                                       
Query: 203 taatatattatatattttatatactaatatatattaatgaataattttctagcactaggg 262
           |||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||
Sbjct: 751 taatatattatatattttatatactaatatatgttaatgaataaaaatctagcactaggg 692

                                                                       
Query: 263 ttaagaattgaattgtcacttattccttctaggagaggaaaaatcatttcctctaacaga 322
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 691 ttaagaattgaattgtcacttattcctgctaggagaggaaaaatcatttcctctaacaga 632

                                                                       
Query: 323 gtaacactagttataccaaccagtccaggacagtccttatattcaggagttgttgaccag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gtaacactagttataccaaccagtccaggacagtccttatattcaggagttgttgaccag 572

                                                                       
Query: 383 catataatggactccacagttatatgtgtgtgagtgatagagacagtgtgtgtatgtgtg 442
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 571 catataatggactccacagttatatgtgtgtgagtgagagagacagtgtgtgtatgtgtg 512

                                                                       
Query: 443 cattgttttattttattacactttggtgtttattttgtgggggtggatattttattttat 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 cattgttttattttattacactttggtgtttattttgtgggggtggatattttattttat 452

            
Query: 503 t 503
           |
Sbjct: 451 t 451


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space:   440249
Effective search space used:   440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)