Query= MSMg01no477_k18.b1 MSMg01no477_k18.b1 CHROMAT_FILE:
MSMg01no477_k18.b1 PHD_FILE: MSMg01no477_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:11 2005
(646 letters)
>mm_chr9_67148244_67149289
Length = 1046
Score = 1236 bits (639), Expect = 0.0
Identities = 644/646 (99%)
Strand = Plus / Plus
Query: 1 tttacctaagcagttacttacactttgtgtctcagtttcccatcagcaaaatggccatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttacctaagcagttacttacactttgtgtctcagtttcccatcagcaaaatggccatga 260
Query: 61 taaacacagcatagctgtgagcatganaccgagtaccatccacaaagcatgaaatgtaca 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 taaacacagcatagctgtgagcatgaaaccgagtaccatccacaaagcatgaaatgtaca 320
Query: 121 cttaaaaacataagcttcttatttgctaatctcacacactgtgatggcaagggagccacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaaaaacataagcttcttatttgctaatctcacacactgtgatggcaagggagccacg 380
Query: 181 aggatcctagagcaggacgacactggatttaatttgtttattcattttccatctagtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggatcctagagcaggacgacactggatttaatttgtttattcattttccatctagtttc 440
Query: 241 ttgtatccttcaagcacagaggccttttgttggtttttaaaatgactctctgttgaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtatccttcaagcacagaggccttttgttggtttttaaaatgactctctgttgaaaca 500
Query: 301 gctaaggaactgctgactgggctaaccggccttgctctcaccagccagcttccagctgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctaaggaactgctgactgggctaaccggccttgctctcaccagccagcttccagctgcc 560
Query: 361 acaggccggatggatgctctttcctttggcttctgcaaggctcactctgactgacttctg 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 acaggccggatggatgctctttcctttggcctctgcaaggctcactctgactgacttctg 620
Query: 421 ggtgggggctcttcagagatttttgcagaaaaaaaaaaagagaaaagtcaagttgcatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtgggggctcttcagagatttttgcagaaaaaaaaaaagagaaaagtcaagttgcatta 680
Query: 481 aggttggaatcccttttactgaggctcggggagttgctcagtggaaaagcaagtacctag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggttggaatcccttttactgaggctcggggagttgctcagtggaaaagcaagtacctag 740
Query: 541 tgtcaggtcccaaagaaacctgggacaaatgactaacggtggtgcccactagcataccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtcaggtcccaaagaaacctgggacaaatgactaacggtggtgcccactagcataccaa 800
Query: 601 ggcacacgcaggcctccaggccactcagtacctgtggcacctctca 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggcacacgcaggcctccaggccactcagtacctgtggcacctctca 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_k18.g1 MSMg01no477_k18.g1 CHROMAT_FILE:
MSMg01no477_k18.g1 PHD_FILE: MSMg01no477_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:11 2005
(639 letters)
>mm_chr9_67312985_67314028
Length = 1044
Score = 977 bits (505), Expect = 0.0
Identities = 535/553 (96%), Gaps = 15/553 (2%)
Strand = Plus / Minus
Query: 1 tctagaacaataaagacttcctaacccccctcacatttttgatctgga-----cataatg 55
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |
Sbjct: 548 tctagaacaataaagacttcctaaccccgctcacatttttgatctggaaagcccataaag 489
Query: 56 aggaaatacaacaaaacagaaggattgcagcctctcacgtgccctctgcataaagacaca 115
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 488 aggaaatacaacaaaacagaaggattgcagcctctcacgtggcctctgcataaagacaca 429
Query: 116 ctttaccccactttgcattcacatcctttgcaccattaactgaacatttacaggattgtt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctttaccccactttgcattcacatcctttgcaccattaactgaacatttacaggattgtt 369
Query: 176 tttagtcatttaattaatgcaaagtatgtctttaataatcatttgcataaaataactaat 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tttagtcatttaattaatgcaaagtatgtctttaataatcatttgcataaaataactaat 309
Query: 236 taaaacattttc-----ttttttagtatatgggacatttgtcctaagatgtagaccacaa 290
|||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 308 taaaacattttccaaag-----tagtatatgggacatttgtcctaagatgtagaccacaa 254
Query: 291 aaataaagttatctgtgcctgtgtaattgttggactcatttagtcctaataacagcatat 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aaataaagttatctgtgcctgtgtaattgttggactcatttagtcctaataacagcatat 194
Query: 351 taaagcatctaaaatgtttctgtggtagaaaactccttttaatttttgttaagccagcgt 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 taaagcatctaaaatgtttctgtggtagaaaactccttttaatttttgttaagccagcgt 134
Query: 411 ttcccacattcaatgaagaaacttttgttaatgcaatactttttatttttaagattttat 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttcccacattcaatgaagaaacttttgttaatgcaatactttttatttttaagattttat 74
Query: 471 ttttttgtgaaagtgcttatctctgtgtctgtatgtgtactgtgtctacatattatgacc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ttttttgtgaaagtgcttatctctgtgtctgtatgtgtactgtgtctacatattatgacc 14
Query: 531 aggggagggtaga 543
|||||||||||||
Sbjct: 13 aggggagggtaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1044
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1034
Effective search space: 650386
Effective search space used: 650386
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
