XXXXXXXXXXXXXXXXXXXXXXXXTCAAACACGAGCCGCGGAATTCTTTG
TTTCCATCAAAGCCCCATTTTTTAATAGGGTTATTTGATTTTCTGGAGTC
CACCTTCTTGACTTCTTTATATATATTGGATATTAGTCCCCATGTGATTT
AGGATTGGTAGAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTAT
TGACAGTAACTTTTGCCTTACAGAAGCTTTGTAATTTTATTAGGTCCCAT
TTGTCGATTCTCGATCTTACAGCACAAGCTATTGCTGTTCTATTCAGGAA
TGTTTCTCTTCNTCCTATATCTTTGAGGCTTTTCCCCACTTTCTCCTCTA
TAAGTTTCACTGTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGAT
TTGACCTTAGTACAAGGAGATATAAATGGATCAATTCACATTCTTCTACA
TGATAACCGCCAGTTGTGCCCGCACCATTTGTTGAAAATGCTGTCTTTTT
TCCACTGGATGGTTTTTGCTCCCTTGTCAAAGATCAAGTGGCCACAGGTA
TGTGGGTTCATTTCTGGGTCTTCAATTCTATTACATTGGTCTTCTTGTCT
GTCGCTATACCAGTACCATGCAGTTTTTTTTTTTTTTATTACAATTGCCC
TGTAGNACAGCTTTAGGTCAGGCATGGTCATTCCATCAGAGGTTCTTTTA
TCATTGAGAAGAGTTTTGGCTATTCTAGGTTTTTTGN

GGGAGGCCTGGAGGCCGCCTGGTTCAAAACAGGGAGGTGAACTATAGAAG
TACCAGCGGAGTTCTAGGAAAGCCTGGGATTAGGGACTCTGAGACCTTGT
TGCACAAAAGCAAAACCAAAACATATCCATGGAAATCAATTAGTGAGGCA
TAGACAATGGGAGTCCAGGATGTCGCTAAATAGTTTATCTGTTTAGAATA
ACAAAATCTTGGTTGAGACCCATGCCCTGCCTGACACTGCCTGGAGGGCT
AGGAATCAGAGTCTAGATGGCCTAGAGACATAAGATAGAACCAAACATGA
CTGGCAAGTAAAATCAGGGAAATAATTCCTAATGATAGACTGGAGCTTAG
CATAACCATCACCAGAGAGACTTCATTTAGCAACTGATAGGAGTAGATGC
AGAGACTTACAGCCAAAGAGTAGGTGGAGCTATGGGAATTTTATGGAAGC
AGGAAGTGTAGGAACCAGAGGTGGTCTAGGACATCAGCAGAACACAGCCC
ACAGATCCAGAGAATCAACTAAATAGAGATCAGAGACTCAAGGAGACTGA
AGGGACACTCAGGGAGACTATATGGATCTGACCTAGGTCTTCAGCAAATA
TGCCAGGGTTGTGTAGATTGGTCTTCTCATGGGAATCTAACAGTTGGGGC
AGGGGTTGTCTCGGATTCTTTCAAAGATTGCTCTCCTCCCACTTGGTTTC
ATTGTACAGCTTTAATATGAGAGAGTTGTTTAGTCTTATTA

Query= MSMg01no478_f16.g1 MSMg01no478_f16.g1 CHROMAT_FILE:
MSMg01no478_f16.g1 PHD_FILE: MSMg01no478_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:04 2005
         (660 letters)



>mm_chr9_82076572_82077631
          Length = 1060

 Score = 1230 bits (636), Expect = 0.0
 Identities = 654/660 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaggaaagcctgggattagggactctgagaccttgttgcacaaaagcaaaaccaaaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaggaaagcctgggattagggactctgagaccttgttgcacaaaagcaaaaccaaaaca 260

                                                                       
Query: 61  tatccatggaaatcaattagtgaggcatagacaatgggagtccaggatgtcgctaaatag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatccatggaaatcaattagtgaggcatagacaatgggagtccaggatgtcgctaaatag 320

                                                                       
Query: 121 tttatctgtttagaataacaaaatcttggttgagacccatgccctgcctgacactgcctg 180
           ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 tttgtctgtttagaataacaaaatcttggttgagacccatgccctgcccgacactgcctg 380

                                                                       
Query: 181 gagggctaggaatcagagtctagatggcctagagacataagatagaaccaaacatgactg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagggctaggaatcagagtctagatggcctagagacataagatagaaccaaacatgactg 440

                                                                       
Query: 241 gcaagtaaaatcagggaaataattcctaatgatagactggagcttagcataaccatcacc 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaggaaaatcagggaaataattcctaatgatagactggagcttagcataaccatcacc 500

                                                                       
Query: 301 agagagacttcatttagcaactgataggagtagatgcagagacttacagccaaagagtag 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 agagagacttcatttagcaactgataggagtagatgcagagactcacagccaaagagtag 560

                                                                       
Query: 361 gtggagctatgggaattttatggaagcaggaagtgtaggaaccagaggtggtctaggaca 420
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 gtggagctatgggaattttatggaagcaggaactgtaggaaccagaggtggtctaggaca 620

                                                                       
Query: 421 tcagcagaacacagcccacagatccagagaatcaactaaatagagatcagagactcaagg 480
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcagcagaacacaacccacagatccagagaatcaactaaatagagatcagagactcaagg 680

                                                                       
Query: 481 agactgaagggacactcagggagactatatggatctgacctaggtcttcagcaaatatgc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agactgaagggacactcagggagactatatggatctgacctaggtcttcagcaaatatgc 740

                                                                       
Query: 541 cagggttgtgtagattggtcttctcatgggaatctaacagttggggcaggggttgtctcg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagggttgtgtagattggtcttctcatgggaatctaacagttggggcaggggttgtctcg 800

                                                                       
Query: 601 gattctttcaaagattgctctcctcccacttggtttcattgtacagctttaatatgagag 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gattctttcaaagattgctctcctcccacttggtttcattgtacagctttaatatgagag 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)