Query= MSMg01no478_h23.b1 MSMg01no478_h23.b1 CHROMAT_FILE:
MSMg01no478_h23.b1 PHD_FILE: MSMg01no478_h23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:14 2005
(665 letters)
>mm_chr9_76105731_76106795
Length = 1065
Score = 1263 bits (653), Expect = 0.0
Identities = 662/665 (99%)
Strand = Plus / Plus
Query: 1 tttttctagttcctgcaagcaacttcatccacagctgtacattcttactgagttttctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttctagttcctgcaagcaacttcatccacagctgtacattcttactgagttttctcc 260
Query: 61 ctgtgaggtgattcttctttgttcttcatttgactatttcttcaaattttttgttaaagt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatgaggtgattcttctttgttcttcatttgactatttcttcaaattttttgttaaagt 320
Query: 121 cctttttgtaatccaccgatggacctcagcaggtaagcccaccaaccttgtaagacatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttttgtaatccaccgatggacctcagcaggtaagcccaccaaccttgtaagacatag 380
Query: 181 agtttgtatgtagcttatcatttctatggcatcatcacatttgctacaaatgatctctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtttgtatgtagcttatcatttctatggcatcatcacatttgctacaaatgatctctga 440
Query: 241 tgtttaaaaatttcttctctttataagaaatcaaggagctgttgaattgaaaaaaacaaa 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttaaaaattacttctctttataagaaatcaaggagctgttgaattgaaaaaaacaaa 500
Query: 301 aacaaaaacaaaaacaaacaacaacaacaacaaaactcttaacattttggttccaaacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacaaaaacaaaaacaaacaacaacaacaacaaaactcttaacattttggttccaaacag 560
Query: 361 tttaaattatttttagtaatgggtatttgtgagttctcccagttttctttcattttctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttaaattatttttagtaatgggtatttgtgagttctcccagttttctttcattttctta 620
Query: 421 ttgtttgtttgtttgtttgtgttttgagacagggtttctctgtatagccctggatgtcct 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtttgtttgtttgtttgtgtttcgagacagggtttctctgtatagccctggatgtcct 680
Query: 481 ggaacttactttgtagactaggctagcctcgaactcagaaatctgcctgcctctgcctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaacttactttgtagactaggctagcctcgaactcagaaatctgcctgcctctgcctcc 740
Query: 541 cgagtgctgggattaaaggcgtgcaccaccacgcctagcttccagttttctttcatatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cgagtgctgggattaaaggcgtgcaccaccacgcctagcttccagttttctttcatatga 800
Query: 601 attccattatctgttcatgcaagcattatgatcaccacctggaaagggtgatggggactg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 attccattatctgttcatgcaagcattatgatcaccacctggaaagggtgatggggactg 860
Query: 661 tgggg 665
|||||
Sbjct: 861 tgggg 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_h23.g1 MSMg01no478_h23.g1 CHROMAT_FILE:
MSMg01no478_h23.g1 PHD_FILE: MSMg01no478_h23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:14 2005
(695 letters)
>mm_chr9_76328694_76329795
Length = 1102
Score = 1288 bits (666), Expect = 0.0
Identities = 690/702 (98%), Gaps = 7/702 (0%)
Strand = Plus / Minus
Query: 1 acttgttggctcactggcattaaatgtttattattttgtaggtacttgtggtgtatccag 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 acttcttggctcactggcattaaatgtttattattttgtaggtacttgtggtgtatccag 843
Query: 61 ttgatcctttccaggagccagacaactagtatgtcttgtgaacaagccagtgaaggtacc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 842 ttgatcctttccaggagccagacaactagcatgtcttgtgaacaagccagtgaaggtacc 783
Query: 121 gaatgtagggaagacataaaagagaaggtactctaggcaggcaaaaggtagtcaagt--- 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gaatgtagggaagacataaaagagaaggtactctaggcaggcaaaaggtagtcaagtatg 723
Query: 178 ----atgcatgcttgggcaatgaagagtttgtgatttgctcatggcatttatgggaatgg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atcaatgcatgcttgggcaatgaagagtttgtgatttgctcatggcatttatgggaatgg 663
Query: 234 aaagaagaagggtaaatttgttagaaaagaggttttgaggtaaaaattgaaggactctat 293
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 662 aaagaagaaggggaaatttgttagaaaagaggttttgaggtaaaaattgagggactctat 603
Query: 294 gccccaagccagagtttacacttcaatttgaaagccctaaggaatctttgacagctttta 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gccccaagccagagtttacacttcaatttgaaagccctaaggaatctttgacagctttta 543
Query: 354 tgtatggaatggcctgcaaatttgggaaggcacactaaatctcggaagtgaggttaatat 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgtatggaatggcctgcaaatttgggaaggcacactaaatctcggaagtgaggttaatat 483
Query: 414 tagctgggaagtaaacgcagagatttaagagctacaggaagctgctgcagatgtggtatc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tagctgggaagtaaacgcagagatttaagagctacaggaagctgctgcagatgtggtatc 423
Query: 474 ccaaggcctttttactgggtaacgaaataatgcattcacatttgaaagtcataactattg 533
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 422 ccaaggcctttttactgggtaacgaaataatgcattcacatttgaaattcataactattg 363
Query: 534 cagaattggaataaaattgataactatatttatctatcatttttatttatactggcacat 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cagaattggaataaaattgataactatatttatctatcatttttatttatactggcacat 303
Query: 594 aataattgtgaatatttatcgtgatagttcaacttttgtcaatatctcagggtaaataga 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aataattgtgaatatttatcgtgatagttcaacttttgtcaatatctcagggtaaataga 243
Query: 654 gttgtcaacaatgatcatgtattgtatgtcatattctttaaa 695
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gttgtcaacaatgatcatgtattgtatgtcatattctttaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1102
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1092
Effective search space: 748020
Effective search space used: 748020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
