MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-478K18
Chromosome	9 (Build37)
Map Location	40,936,609 - 40,936,982
singlet/doublet	singlet
Overlap gene	2810457I06Rik
Upstream gene	1700030E15Rik, LOC235279, Olfr986, Zfp202, Scn3b, Gramd1b, LOC270148, 9030425E11Rik, LOC100043076, LOC100043071, Hspa8, Bsx, 4931429I11Rik, Crtam
Downstream gene	LOC628495, LOC100042464, EG667566, 6720432D03Rik, Sorl1
Link	Open Mouse BAC browser

Click to get alignment info.

name	1700030E15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75667 MGI:1922917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 3 Proteins

name	LOC235279 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:235279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Olfr986 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258608 MGI:3030820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp202 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80902 MGI:1933401
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235281 MGI:1918882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Gramd1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235283 MGI:1925037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC270148 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:270148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 145 ESTs, 5 Proteins pseudo : _no_value

name	9030425E11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71566 MGI:1918816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043076 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043071 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Hspa8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15481 MGI:105384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bsx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244813 MGI:2669849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931429I11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70989 MGI:1918239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crtam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54698 MGI:1859822
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810457I06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72828 MGI:1920078
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC628495 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042464 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667566 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667566 MGI:3643201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	6720432D03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77740 MGI:1924990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Sorl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20660 MGI:1202296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700030E15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386077 GeneID:75667 MGI:1922917
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 3 Proteins product : RIKEN cDNA 1700030E15 gene transcript_id : XM_134639.3

name	Olfr986 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33239359 GeneID:258608 MGI:3030820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 986 transcript_id : NM_146615.1

name	Zfp202 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507659 GeneID:80902 MGI:1933401
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 202 transcript_id : NM_030713.1

name	Scn3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922635 GeneID:235281 MGI:1918882
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type III, beta transcript_id : NM_153522.2

name	Scn3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922642 GeneID:235281 MGI:1918882
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type III, beta transcript_id : NM_178227.4

name	Scn3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922658 GeneID:235281 MGI:1918882
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type III, beta transcript_id : NM_001083917.1

name	Gramd1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27777682 GeneID:235283 MGI:1925037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GRAM domain containing 1B transcript_id : NM_172768.1

name	9030425E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370518 GeneID:71566 MGI:1918816
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030425E11 gene transcript_id : NM_133733.3

name	LOC100043076 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259943 GeneID:100043076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043076 transcript_id : XM_001479085.1

name	LOC100043071 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259941 GeneID:100043071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043071 transcript_id : XM_001479079.1

name	Hspa8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681696 GeneID:15481 MGI:105384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 8 transcript_id : NM_031165.4

name	Bsx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130559 GeneID:244813 MGI:2669849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain specific homeobox transcript_id : NM_178245.3

name	4931429I11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487448 GeneID:70989 MGI:1918239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4931429I11 gene transcript_id : NM_001081121.1

name	Crtam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119360369 GeneID:54698 MGI:1859822
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytotoxic and regulatory T cell molecule transcript_id : NM_019465.2

name	2810457I06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375611 GeneID:72828 MGI:1920078
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810457I06 gene transcript_id : NM_176860.4

name	LOC100042464 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259901 GeneID:100042464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042464 transcript_id : XM_001478267.1

name	6720432D03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259905 GeneID:77740 MGI:1924990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 6720432D03 gene transcript_id : XM_001478273.1

name	Sorl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372316 GeneID:20660 MGI:1202296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sortilin-related receptor, LDLR class A repeats-containing transcript_id : NM_011436.3

name	1700030E15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20884809 GeneID:75667 MGI:1922917
definition	codon_start : 1 product : hypothetical protein LOC75667 protein_id : XP_134639.1

name	Olfr986 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239360 CCDS:CCDS23078.1 GeneID:258608 MGI:3030820
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2PVTD-33886895-33887833; olfactory receptor MOR104-3 product : olfactory receptor 986 protein_id : NP_666826.1

name	Zfp202 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507660 CCDS:CCDS23079.1 GeneID:80902 MGI:1933401
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation note : zinc finger 202 product : zinc finger protein 202 protein_id : NP_109638.1

name	Scn3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922659 GeneID:235281 MGI:1918882
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005272 - sodium channel activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : brain and heart sodium channel beta 3 subunit product : voltage-gated sodium channel beta-3 subunit protein_id : NP_001077386.1

name	Scn3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922636 CCDS:CCDS23080.1 GeneID:235281 MGI:1918882
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005272 - sodium channel activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : brain and heart sodium channel beta 3 subunit product : voltage-gated sodium channel beta-3 subunit protein_id : NP_705742.2

name	Scn3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30089679 CCDS:CCDS23080.1 GeneID:235281 MGI:1918882
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005272 - sodium channel activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : brain and heart sodium channel beta 3 subunit product : voltage-gated sodium channel beta-3 subunit protein_id : NP_839941.1

name	Gramd1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27777683 CCDS:CCDS23081.1 GeneID:235283 MGI:1925037
definition	codon_start : 1 product : GRAM domain containing 1B protein_id : NP_766356.1

name	9030425E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542035 CCDS:CCDS23082.1 GeneID:71566 MGI:1918816
definition	codon_start : 1 note : adipocyte adhesion molecule; CAR-like membrane protein; adipocyte-specific protein 5 product : adipocyte-specific adhesion molecule protein_id : NP_598494.2

name	LOC100043076 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259944 GeneID:100043076
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479135.1

name	LOC100043071 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259942 GeneID:100043071
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479129.1

name	Hspa8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981690 CCDS:CCDS23083.1 GeneID:15481 MGI:105384
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0042623 - ATPase activity, coupled [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0051082 - unfolded protein binding [Evidence IPI] GO_process : GO:0051085 - chaperone cofactor-dependent protein folding [Evidence IGI]; GO:0006457 - protein folding [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IDA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock protein cognate 70; heat shock 70kD protein 8; heat shock cognate hsc73 product : heat shock protein 8 protein_id : NP_112442.2

name	Bsx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30142687 CCDS:CCDS23084.1 GeneID:244813 MGI:2669849
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence ISS] GO_process : GO:0007420 - brain development [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : brain specific homeobox protein_id : NP_839976.1

name	4931429I11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487449 GeneID:70989 MGI:1918239
definition	codon_start : 1 product : hypothetical protein LOC70989 protein_id : NP_001074590.1

name	Crtam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119360370 GeneID:54698 MGI:1859822
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : class I-restricted T cell-associated molecule product : cytotoxic and regulatory T cell molecule protein_id : NP_062338.2

name	2810457I06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28849905 CCDS:CCDS23085.1 GeneID:72828 MGI:1920078
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : RIKEN cDNA 2810457I06 protein_id : NP_789830.1

name	LOC100042464 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259902 GeneID:100042464
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478317.1

name	6720432D03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259906 GeneID:77740 MGI:1924990
definition	codon_start : 1 product : hypothetical protein LOC77740 protein_id : XP_001478323.1

name	Sorl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625645 GeneID:20660 MGI:1202296
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0008565 - protein transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006897 - endocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : sortilin-related receptor, LDLR class A repeats-containing protein_id : NP_035566.2

name	LOC628495 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628495
definition	number : 1 pseudo : _no_value

name	EG667566 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667566
definition	number : 1 pseudo : _no_value

name	LOC235279 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259898 GeneID:235279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to rRNA-processing protein FCF1 homolog pseudo : _no_value transcript_id : XR_033573.1

name	LOC270148 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259940 GeneID:270148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 145 ESTs, 5 Proteins product : similar to ribosomal protein S7 pseudo : _no_value transcript_id : XR_034043.1

clone name	MSMg01-510F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501K22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-368C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-093K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178J02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-478K18.T7 (MSMg01no478_k18.b1)	MSMg01-478K18.TJ (MSMg01no478_k18.g1)
ACC	AG559733	AG559734
length	717	732
length of high quality (start - end)	543 (70 - 612)	374 (316 - 689)
definition	CHROMAT_FILE: MSMg01no478_k18.b1 PHD_FILE: MSMg01no478_k18.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:58:26 2005	CHROMAT_FILE: MSMg01no478_k18.g1 PHD_FILE: MSMg01no478_k18.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:58:26 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TTGCGGCCGCAATAGGACTCACTTTTTCAAGAGGAGGGCGCGGAATTCAN GGCCTATCCCTAAACATGATAAAAAGCCATCTACAGCAAACCAGTAGCCA ACATCAAAGTAAATGATGAGAAGCTGAAAGCAATCACACTAAAATCAGGG ACTAGACAAGGCTGCCCACTTTCTCCCTACTTATTCAACATAGTACTTGA AGTTGTAGCCAGAGCAATTTGACAACAAAAGGAGATCAAGGGGATATAAA TTGGAAAAGAAGAAGTCAAAATATCACTATTTTCAGATGATATAATAGTA TATATATAATTGTTTTATAAGTGACCCTACAAATTCCACCAGAGAACTCC TAAACCTGAAAAACAGCTTCAGTGAACTAGCTGGATATAAAATTAACTCA AACAAGTCAATGGCCTTTCTCTACACAAAGGATAAACAGGCTGAGAAAGA AATTAGAGAACCAACACCCTTCACAATAGTCACAAATAATATAAAATACC TTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATAATAAGAACTTC AAATCTCTCAAGAAAGAAATCAAAGAAGATCTCAGAAGATGGAAAGATCT CCCATGCTCATGGATTGGCAGGATCAACATAGTAAAAATGGTGCCCTTGC CCAAAAGCAAGGTACCGAATCAATGGCATCCCCCTTCAAAATTCCCAACC CATTTTTCTCAGGAGAA	GTGGGAGGCCTGGNGGCCGCCTGTTTCACAAAGGGGGGTGAACTATAGAA GTACAGAGGAAGTCCACTAAGCGGGTTGGTCCACGGCAGGCTTTAGTGCA GAGCCCTCTTAGTGGGGTGAGGGACAGCAGACTCCCAGAGCTGGGTTAGT CTAGACCAGCAGTTCTCAACCTGTGGGTCTGACCCCCTTCACAGAAGTTG CCTGAGACCATCAGAAAACACAGATATTTATGTTACAATTCATAAGAGTA ACAAATAAAATTGCGTTATAATGTAGCAATGAAAATAATTTTATGGTTGG GGCATCTCCTCTTCTTGAGGAACGGTTATTAAAGAATAGAGACATTAGGA AGGTTGAGAGCCACTGAGCTAGACCTTCCATGAGAGAGCCTATTCCTTCC GTCTTGGCTGTCAGTCAGAAGGAGATCTACTCCTGAGTCTCCAGGAATGA GAGGAAGAAGAAAAGGCAAAAGAGGGGTTCTGAAGGAGGTATTTTTTTGA GATAGGATCTCGCTCTGCAGCCCAGGCTGGTCTGAAATTCACCATGTTGA CTGCTCTAGCGTGCTTTCTGTGGTTGTCATAAACACCATGACCAAAAGCA ACTTCGGGAAGAAAGTGTTTATTTCAGTTTAGACTTCAGGCCATAGTTCA TCACTGAAGTCAGGGCAAGGGTTCAAGCAGCAACTTAGGCGGAGACCAGG GAGGAGCACTGCTCACTGGCTTTGACAGCCCA
quality values	Open. Hide. 26 28 30 30 30 25 22 10 15 10 8 8 19 11 15 15 30 19 10 10 9 9 9 12 7 9 9 7 7 6 11 10 8 8 8 8 8 8 11 10 21 27 37 37 37 33 21 21 3 0 3 9 9 9 6 6 6 6 7 6 10 11 12 11 13 10 10 14 16 15 14 30 30 47 47 53 53 50 50 50 50 37 37 40 40 40 40 43 48 48 48 53 53 68 68 68 48 48 48 48 48 51 53 53 48 48 47 42 44 37 30 28 22 24 22 23 18 26 32 44 59 59 57 57 57 57 57 57 57 57 68 50 50 47 47 47 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 48 48 50 57 57 57 57 57 57 57 57 54 54 54 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 44 32 21 16 16 24 24 20 31 31 57 44 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 23 23 8 6 6 6 7 7 11 11 11 18 20 37 37 41 50 50 50 50 48 48 48 48 48 57 59 59 59 59 57 53 53 50 50 53 53 57 57 68 68 57 59 48 46 46 43 43 46 48 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 68 59 59 68 68 59 59 57 57 52 57 48 48 48 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 57 57 68 68 68 57 57 68 68 68 57 57 57 57 57 57 59 54 54 57 57 57 57 57 68 59 59 43 47 46 59 59 59 59 59 68 68 68 68 59 59 59 59 59 59 59 43 43 37 43 39 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 41 37 37 43 59 59 59 59 59 59 48 48 48 48 48 48 57 57 57 57 57 57 57 50 50 50 48 41 41 39 23 13 10 9 9 9 12 27 30 59 41 34 34 39 37 39 44 44 39 39 43 43 36 36 36 41 43 59 48 48 41 41 40 39 37 30 30 31 27 30 25 30 31 41 41 41 37 39 35 36 36 43 39 59 37 37 30 31 31 30 30 30 25 14 14 13 12 11 13 21 27 27 21 21 15 15 10 10 9 10 13 17 17 19 15 21 22 23 23 19 26 22 11 11 10 10 9 8 9 9 8 8 9 9 10 10 8 8 9 10 12 11 11 10 10 9 9 9 9 9 9 9 13 8 10 8 8 8 8 10 10 10 12 17 14 10 10 10 10 14 20 24 28 28 21 11 8 7 7 10 9 9 10 10 10 10 6 6 6 8 6 6 8 6 6 6 6 8 6	Open. Hide. 8 11 15 8 8 10 16 17 20 19 23 23 3 0 3 25 19 37 44 23 19 9 9 8 10 9 8 8 8 8 9 8 18 14 16 12 14 23 19 10 10 10 23 22 33 25 21 11 9 9 9 7 7 7 7 7 7 7 10 11 12 12 10 10 10 10 15 19 34 39 53 59 57 57 57 57 57 53 50 50 50 50 50 43 43 48 50 53 53 68 68 68 68 68 68 68 48 48 48 47 37 34 30 18 23 36 32 39 24 21 13 13 15 28 35 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 54 54 52 52 52 52 52 57 57 52 57 57 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 44 42 28 19 24 19 13 13 12 27 32 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 23 22 9 10 9 9 9 9 9 9 10 10 10 10 21 30 47 37 50 50 50 50 50 53 57 57 57 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 44 41 41 21 21 41 31 37 39 47 59 59 57 57 57 57 57 57 57 57 57 57 68 68 68 68 59 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 54 54 59 59 57 54 52 52 44 44 33 27 27 44 44 57 57 57 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 59 68 59 59 54 57 57 57 57 57 57 48 48 48 59 48 54 54 59 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 59 59 59 54 54 57 57 57 57 59 57 57 57 59 59 57 57 59 59 59 59 59 59 59 59 59 59 59 59 48 48 47 59 59 59 47 44 39 32 32 37 37 37 37 41 41 41 59 48 48 48 57 59 59 59 59 48 48 48 57 48 48 57 57 43 43 43 47 47 59 59 59 59 43 39 39 39 39 43 43 43 43 46 43 43 41 46 39 42 42 47 43 42 42 39 39 39 40 40 43 43 48 48 48 48 57 59 43 37 37 37 43 43 41 41 41 39 39 24 21 15 15 15 27 30 43 39 41 37 39 35 39 37 37 30 30 30 37 37 39 32 28 24 22 20 19 24 24 22 22 30 31 39 40 47 40 41 37 39 35 31 26 32 37 37 32 29 29 29 32 28 28 31 31 38 30 29 25 22 22 28 24 23 32 25 25 25 34 30 26 14 14 14 23 18 26 19 19 15 19 18 26 24 11 9 10 9 10 10 14 14 26 29 26 17 17 16 26 27 37 37 31 26 30 25 30 30 33 30 25 37 30 19 19 19 17

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no478_k18.g1 MSMg01no478_k18.g1 CHROMAT_FILE:
MSMg01no478_k18.g1 PHD_FILE: MSMg01no478_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:26 2005
         (374 letters)



>mm_chr9_40936409_40937182
          Length = 774

 Score =  723 bits (374), Expect = 0.0
 Identities = 374/374 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaggaacggttattaaagaatagagacattaggaaggttgagagccactgagctagacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaggaacggttattaaagaatagagacattaggaaggttgagagccactgagctagacc 260

                                                                       
Query: 61  ttccatgagagagcctattccttccgtcttggctgtcagtcagaaggagatctactcctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccatgagagagcctattccttccgtcttggctgtcagtcagaaggagatctactcctg 320

                                                                       
Query: 121 agtctccaggaatgagaggaagaagaaaaggcaaaagaggggttctgaaggaggtatttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtctccaggaatgagaggaagaagaaaaggcaaaagaggggttctgaaggaggtatttt 380

                                                                       
Query: 181 tttgagataggatctcgctctgcagcccaggctggtctgaaattcaccatgttgactgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgagataggatctcgctctgcagcccaggctggtctgaaattcaccatgttgactgct 440

                                                                       
Query: 241 ctagcgtgctttctgtggttgtcataaacaccatgaccaaaagcaacttcgggaagaaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagcgtgctttctgtggttgtcataaacaccatgaccaaaagcaacttcgggaagaaag 500

                                                                       
Query: 301 tgtttatttcagtttagacttcaggccatagttcatcactgaagtcagggcaagggttca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtttatttcagtttagacttcaggccatagttcatcactgaagtcagggcaagggttca 560

                         
Query: 361 agcagcaacttagg 374
           ||||||||||||||
Sbjct: 561 agcagcaacttagg 574


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space:   279225
Effective search space used:   279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information