Query= MSMg01no478_l04.b1 MSMg01no478_l04.b1 CHROMAT_FILE:
MSMg01no478_l04.b1 PHD_FILE: MSMg01no478_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:28 2005
(360 letters)
>mm_chr9_103473518_103474277
Length = 760
Score = 688 bits (356), Expect = 0.0
Identities = 359/360 (99%)
Strand = Plus / Minus
Query: 1 ctccttctccaaatgactcagaaattaagaggtacctagaggaagtgctcttttccaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctccttctccaaatgactcagaaattaagaggtacctagaggaagtgctcttttccaaac 501
Query: 61 catctggcccatccagatgaacctacatctgtagcgggcttcagctgttctgagctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catctggcccatccagatgaacctacatctgtagcgggcttcagctgttctgagctgcag 441
Query: 121 ccttcccagcatcccctgctgtgctcagacacagagcatctcatcgtcaccagaagctgg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 ccttcccagcatcccctgctgtgctcagacacagagcatctcagcgtcaccagaagctgg 381
Query: 181 cccacatgtgccagtctaagaagggaacagcaccgtggccactcattccacaggatccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccacatgtgccagtctaagaagggaacagcaccgtggccactcattccacaggatccca 321
Query: 241 aggacttctgtgacagcctgaatgcttcaatggtttgtgagatgctggtccagcagcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggacttctgtgacagcctgaatgcttcaatggtttgtgagatgctggtccagcagcctg 261
Query: 301 gcaaccatccccgattaaaggagattaagagggcatagcgagcccgggcaccatgttagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcaaccatccccgattaaaggagattaagagggcatagcgagcccgggcaccatgttagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_l04.g1 MSMg01no478_l04.g1 CHROMAT_FILE:
MSMg01no478_l04.g1 PHD_FILE: MSMg01no478_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:28 2005
(316 letters)
>mm_chr9_103324682_103325397
Length = 716
Score = 559 bits (289), Expect = e-164
Identities = 307/315 (97%), Gaps = 4/315 (1%)
Strand = Plus / Plus
Query: 1 gggaaggggccatgcaaactgtacagtgccactttgctttgtttactccttgccccacca 60
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 201 gggaaggggccatgcaaactgtacagtgccacgttgctttgtttagtccttgccccacca 260
Query: 61 agattgtcaacccatgagaacagaaatgatcttccttatatgggtattccccctcccgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 agattgtcaacccatgagaacagaaatgatcttccttatatgggtattccccctcccccc 320
Query: 121 agtctgtcaaaacatttgagcatcaatccatgcttaaaagaattaccaatatccttgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtctgtcaaaacatttgagcatcaatccatgcttaaaagaattaccaatatccttgaag 380
Query: 181 tacaatttaaggacattgttatcaaaggatgtgggggtctcaacgctaatgggtgctatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacaatttaaggacattgttatcaaaggatgtgggggtctcaacgctaatgggtgctatt 440
Query: 241 atggtatgtgtgtgtgtgcgtgcgtgcgtgcgtgcgcgcgcgtgtgtgtgtgtgtgtgtg 300
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 441 atggtatgtgtgtgtgtgcgtgcgtgcgtgcgtgcgtg----tgtgtgtgtgtgtgtgtg 496
Query: 301 tgtgtgtgtgtgcgc 315
|||||||||||||||
Sbjct: 497 tgtgtgtgtgtgcgc 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
