Query= MSMg01no479_a09.b1 MSMg01no479_a09.b1 CHROMAT_FILE:
MSMg01no479_a09.b1 PHD_FILE: MSMg01no479_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:52 2005
(693 letters)
>mm_chr9_93763757_93764848
Length = 1092
Score = 1255 bits (649), Expect = 0.0
Identities = 679/689 (98%), Gaps = 1/689 (0%)
Strand = Plus / Plus
Query: 5 gaattccttgatttcctcatttaatcttttcacgaatttcatgtggtgtgtgtgtgtggt 64
||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttgaattactcatttaatcctttcacgaatttcatgtggtgtgtgtgtgtggt 264
Query: 65 ttgttgttttctttagttgagtaatccaattctatcttctctttgatccattctactgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgttgttttctttagttgagtaatccaattctatcttctctttgatccattctactgat 324
Query: 125 atattttatattcaaattattgaatttccttcagtatttctatatctttagggaacaggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atattttatattcaaattattgaatttccttcagtatttctatatctttagggaacaggg 384
Query: 185 ttttaattcctgaattctaattcagattagttgctcattccattcatccatatatctcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttaattcctgaattctaattcagattagttgctcattccattcatccatatatctcag 444
Query: 245 tacttcattcatgtcctcttcattgaaatatcagtgtcttttttaatctcctcgaagtca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacttcattcatgtcctcttcattgaaatatcagtgtcttttttaatctcctcgaagtca 504
Query: 305 catatgtttaagaatgaattttagtttagtgtcctggggttcatctagggaattctcatt 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 505 catatgtttaagaatgaattttactttagtgtcctggggttcatctagggaattctcatt 564
Query: 365 ggagaacatttctagtctgtttaggtggagacctattatcttgaccttctctatgaatgt 424
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 565 ggagaacatttctagtctgtttaggtggagacctattatcttgaccttttatatgaatgt 624
Query: 425 atttctgaatgtagtaatgtgcacatataggcttccttcattggccgtgtgtctgatgtg 484
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 625 atttctgaatgtagtaatgtgcacatataggcttccttcattggccatgtgtctgatgtg 684
Query: 485 aggttctaggctacttctgcaaagtggttatttgctcatttgtgttgtcattcaatcata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggttctaggctacttctgcaaagtggttatttgctcatttgtgttgtcattcaatcata 744
Query: 545 ttgattacatatcagttaagaagagtttgtaggtcaatcattaagataatcagggggatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttgattacatatcagttaagaagagtttgtaggtcaatcattaagataatcagggggatt 804
Query: 605 aaaattcttggcagcaaaaaattcttaagaatgtgagttcttgagtgggtctatttggac 664
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 805 aaaattcttggcagcaaaaa-ttcttaagaatgtgagttcttgagtgggtctgtttggac 863
Query: 665 tattgcgcaaaatatgctacccaacaggg 693
||||| |||||||||||||||||||||||
Sbjct: 864 tattgtgcaaaatatgctacccaacaggg 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1092
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1082
Effective search space: 739006
Effective search space used: 739006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_a09.g1 MSMg01no479_a09.g1 CHROMAT_FILE:
MSMg01no479_a09.g1 PHD_FILE: MSMg01no479_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:52 2005
(570 letters)
>mm_chr9_93884287_93885257
Length = 971
Score = 1052 bits (544), Expect = 0.0
Identities = 564/571 (98%), Gaps = 1/571 (0%)
Strand = Plus / Minus
Query: 1 ctggttgggaccactcagctcctggcattaaggccccaagctccactccacctctccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ctggttgggaccactcagctcctggcattaaggccccaagctccactccacctctccacc 712
Query: 61 tctccccattcttccctctgtcttgttccagctgtaaaccctgggttgttctggtccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tctccccattcttccctctgtcttgttccagctgtaaaccctgggttgttctggtccagt 652
Query: 121 caatcttttcattatatctgtggatcttattttattttgttagggacattgatgatcttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 caatcttttcattatatctgtggatcttattttattttgttagggacattgatgatctta 592
Query: 181 cctttccctattagtggatatttataagtttattttctcccctgcatgcgctctatcaga 240
||||||||||| | || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cctttccctataattgtagatttataagtttattttctcccctgcatgcgctctatcaga 532
Query: 241 cttatcgagtttcttctttttcagaaatgtaatattccttgtatctcattttcttttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cttatcgagtttcttctttttcagaaatgtaatattccttgtatctcattttcttttttc 472
Query: 301 tacgtgtttgatttttatctctccttttcacagaaaaaatttagtaaaagacataatacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tacgtgtttgatttttatctctccttttcacagaaaaaatttagtaaaagacataatacc 412
Query: 361 tgccgatttcatttctgacgtcccagatttctcatagtacttgccactagcatccttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgccgatttcatttctgacgtcccagatttctcatagtacttgccactagcatccttttt 352
Query: 421 gataaatatactgtgtagtgttcatagctttggcgactggcaatgttttacac-gtttat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 351 gataaatatactgtgtagtgttcatagctttggcgactggcaatgttttacacagtttat 292
Query: 480 cactgtgtgttcttagactttccagggcaacattcttacctggatttcttcatgtggnta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 291 cactgtgtgttcttagactttccagggcaacattcttacctggatttcttcatgtggtta 232
Query: 540 tggttgctcctttacagtatctttttaggtg 570
|||||||||||||||||||||||||||||||
Sbjct: 231 tggttgctcctttacagtatctttttaggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space: 538160
Effective search space used: 538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
