Query= MSMg01no480_n18.b1 MSMg01no480_n18.b1 CHROMAT_FILE:
MSMg01no480_n18.b1 PHD_FILE: MSMg01no480_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:18 2005
(659 letters)
>mm_chr9_85374845_85375904
Length = 1060
Score = 1261 bits (652), Expect = 0.0
Identities = 658/660 (99%), Gaps = 1/660 (0%)
Strand = Plus / Plus
Query: 1 cttaactcccagtgctgagtctgtatggtgtcctggcaccatgctaagcgatttacatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaactcccagtgctgagtctgtatggtgtcctggcaccatgctaagcgatttacatga 260
Query: 61 attatctcacatgacgtagctgatattattatgtctattttacaagtgggaaagctagtc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 attatctcacatgacgtagctgatattattatgtctattttacaagtgggaaaggtagtc 320
Query: 121 tagaaagatgacaacattgataaaatacagagcaaggatttgagtgaggtcacattgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagaaagatgacaacattgataaaatacagagcaaggatttgagtgaggtcacattgaat 380
Query: 181 tgaggccttaattgtcatcttcagctttactagacagaaatgattctttgagacagaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaggccttaattgtcatcttcagctttactagacagaaatgattctttgagacagaatg 440
Query: 241 gccaggagcctaatggtctgctgaacctgtaatccacctctttctctgaagttctaggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccaggagcctaatggtctgctgaacctgtaatccacctctttctctgaagttctaggct 500
Query: 301 aaaatatgttgaccagtagagtataatgtcttcatattctcacttgcagacttttcaccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaatatgttgaccagtagagtataatgtcttcatattctcacttgcagacttttcaccc 560
Query: 361 aggatggcttcatgaattcatacaaacatatagatttaaacaaccctgtctttagaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggatggcttcatgaattcatacaaacatatagatttaaacaaccctgtctttagaaaaa 620
Query: 421 aacgacctgtagatgaacacatagcatgagtcttaacatgggatttcatataattaacga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacgacctgtagatgaacacatagcatgagtcttaacatgggatttcatataattaacga 680
Query: 481 tttcttgcgatgtttacaattctggtaaatgtttctcatttttcaaaagatataatacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttcttgcgatgtttacaattctggtaaatgtttctcatttttcaaaagatataatacac 740
Query: 541 tggtgctcaaaaactgctgtatgaagcccattcttggactgagcattgcccttttcatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggtgctcaaaaactgctgtatgaagcccattcttggactgagcattgcccttttcatgg 800
Query: 601 tgcccctctgctaaa-tacagatactgtgagtactgtaacacagctgtgaataagtagat 659
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgcccctctgctaaaatacagatactgtgagtactgtaacacagctgtgaataagtagat 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space: 681450
Effective search space used: 681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_n18.g1 MSMg01no480_n18.g1 CHROMAT_FILE:
MSMg01no480_n18.g1 PHD_FILE: MSMg01no480_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:18 2005
(324 letters)
>mm_chr9_85557520_85558243
Length = 724
Score = 605 bits (313), Expect = e-177
Identities = 319/321 (99%)
Strand = Plus / Minus
Query: 1 ctcaggaaaaacataatccttataaataaaagttcttactttactggagaaaaagtagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ctcaggaaaaacataatccttataaataaaagttcttactttactggagaaaaagtagac 291
Query: 61 acttaatttaacatgccttttcaatcagcttgattcctttgcagtgaagttgagcttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 acttaatttaacatgccttttcaatcagcttgattcctttgcagtgaagttgagcttaat 231
Query: 121 ttttttagtttacttttctccatttatttatttacttatttattcactttacatctcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ttttttagtttacttttctccatttatttatttacttatttattcactttacatctcagt 171
Query: 181 tacagccctcctctcctcctagtcccctctcacacagcccctcctcccattctcctctta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cacagccctcctctcctcctagtcccctctcacacagcccctcctcccattctcctctta 111
Query: 241 gaagggggaggacccccattggcaccaacccaccctggcacatcaaatcactgtacaact 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 110 gaagggggaggacccccattggcaccaacccaccctggcacatcaaatcactgtgcaact 51
Query: 301 aggcacatcctctcccactga 321
|||||||||||||||||||||
Sbjct: 50 aggcacatcctctcccactga 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
