XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXGTCTCTTCGCAAATTAATGAAAATACATAACTTCTTTGTGCCTCT
TTTCCAAATCTTTAAGACAAGCTGAATATAATTCATACTTCCTGGGGCTG
TAAGGGTTAAATGAAGTGATAGTCATGAAAGTTGCAATAGCTCCTGGCAT
AATAATAGTGTGTGCTACAGAAATATTAGCTAGATATACATGAACTTTAT
TTTTAAAGAAGAGTATAGTTTGGGGTGCTAAAACTTCAGAATGTTGCAAA
TTTAAGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTNNNNNNNNNNNNNNNNCGNNNNNNTTNNNNNNT
NGTTTTCCGTTTTTCGCCCTTCTTTCTTTCCGCCTTTTTCGCCCCCNTCT
CTCTCGTNTTTCTCTCCTCTCTTCCCCCCTTCTTTTTTTTCCTCTTCCCT
CTCCCCCCTTCTTTCCTTTTGCTTTTCTCTTTCCTTCTTTCCTTCTCTTC
TTCTTTTTCTCCCTTCTTTTTTTCCTCTCTTCTCCTCTTTCTCCTCTTTT
TCCCTCTTCTTTTTTCCTTCTTTGCGTCCTCCTTTTTCTTTCCCCCCTTT
TTTCTGTTCCCCCCCCTTTTTTTCTTCCTCTTCCTTTTTTTTTCTTTTTT
TTTTCCCTCCTGTTTTTTTCTTCTCCTCCCCCTTTCTTTTTTCTCTTTTC
CTTCCCC

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGGTCTGTTTAGGGCGGCCCAGACTG
GAAGGCTAGTGCATTTGATTTTAAACATGGCATTTAAATTCATTCTTGGT
TTATATAATGTTGGTGATTCTAGACAGTTGACAGTAGCTTATGTTTGCAA
GAGTATTATTGTTACCCATTGGAGTCTTTGTGTTAAGGCTGTCAGACTTC
ACCATTGAAACATAAGATCTTTCACAGTTAGTGAACTGTCTTTTTTGTTT
GTTTGTTTGTTTGTTTGTTTTTGCTAGTAACTTCTTATGTAACCTTGAAA
AAGTCACTTGTTCAGTGCCTAGAGTGTTTGTTTTGTTTTCTCTTTTCTTT
TTTTCTGCAAAGCATTGGACTTTGACAAGATAACATTGAAGCTCTTGCTG
GAACAGTTCTGGAGTGGTTCTGTTGACCAATGCACTGAAATGGTCAAAAT
ATCAAATTCATGACTATGTTGATATCAGCATAGTGATTTGGCTTGATGTG
GATAGTTTTGGTTTAATTTTGGGGTTAATTTTGATTCAAAGTGTTTAGAA
CTTTGTTATGTTGGATGAGCCAAGTGTGCTGTTCTGAATTTCTTTGGGTT
TATAACTGATAATTTTTAAAAGTTTCTCTTTTTCATGCTGTTCTTGCCTA
GTTTGCCAAATTAGTACTCTATTCATATAGTATGAATTTAGAAT

Query= MSMg01no481_a02.g1 MSMg01no481_a02.g1 CHROMAT_FILE:
MSMg01no481_a02.g1 PHD_FILE: MSMg01no481_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:29 2005
         (653 letters)



>mm_chr9_66253575_66254627
          Length = 1053

 Score = 1207 bits (624), Expect = 0.0
 Identities = 645/654 (98%), Gaps = 5/654 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtctgtttagggcggcccagactggaaggctagtgcatttgattttaaacatggcatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtctgtttagggcggcccagactggaaggctagtgcatttgattttaaacatggcatt 260

                                                                       
Query: 61  taaattcattcttggtttatataatgttggtgattctagacagttgacagtagcttatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaattcattcttggtttatataatgttggtgattctagacagttgacagtagcttatgt 320

                                                                       
Query: 121 ttgcaagagtattattgttacccattggagtctttgtgttaaggctgtcagacttcacca 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacaagagtattattgttacccattggagtctttgtgttaaggctgtcagacttcacca 380

                                                                       
Query: 181 ttgaaacataagatctttcacagttagtgaactgtcttttttgtttgtttgtttgtttgt 240
           ||||||||||||||||||||||||||||||| |||||||    |||||||||||||||||
Sbjct: 381 ttgaaacataagatctttcacagttagtgaattgtcttt----tttgtttgtttgtttgt 436

                                                                       
Query: 241 ttgtttttgctagtaacttcttatgtaaccttgaaaaagtcacttgttcagtgcctagag 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 437 ttgtttttgctagtaacttcttatgtaaccttgaaaaagtcacttgttcagtgcctaggg 496

                                                                       
Query: 301 tgtttgttttgttttctcttttctttttttctgcaaagcattggactttgacaagataac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgtttgttttgttttctcttttctttttttctgcaaagcattggactttgacaagataac 556

                                                                       
Query: 361 attgaagctcttgctggaacagttctggagtggttctgttgaccaatgcactgaaatggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 attgaagctcttgctggaacagttctggagtggttctgttgaccaatgcactgaaatggt 616

                                                                       
Query: 421 caaaatatcaaattcatgactatgttgatatcagcatagtgatttggcttgatgtggata 480
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 caaaatatcaaattcatgattatgttgatatcagcatagtgatttggcttgatgtggata 676

                                                                       
Query: 481 gttttggtttaattttggggttaattttgattcaaagtgtttagaactttgttatgttgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gttttggtttaattttggggttaattttgattcaaagtgtttagaactttgttatgttgg 736

                                                                       
Query: 541 atgagccaagtgtgctgttctgaatttctttgggtttataactgataatttttaaaa-gt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 737 atgagccaagtgtgctgttctgaatttctttgggtttataactgataatttttaaaaagt 796

                                                                 
Query: 600 ttctctttttcatgctgttcttgcctagtttgccaaattagtactctattcata 653
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ttctctttttcatgctgttcttgcctagtttgccaaattagtactctattcata 850


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space:   670649
Effective search space used:   670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)