TTTAAGACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAAGA
TCGGCGGAATTCTTTGTTTTTTCTGTACCAAATTTTTAAAAGGTTTGATT
TTCTGAAGTGCAGCTTCTTGAGTTCTTTGTATATATTGGATATTATTTGC
CTATCAGATTCACCATTGGTAAAGATCCTTTCCCAATTTGTTGGTGGCCT
TTTTGTCTTATTGACTGTGTCTTTTGCCTTACAAAAGCTTTGCAATTTTA
TAAGGACCCATTTGTCAAATCTAGATGTTACATCACAAGCCATTAGTGTT
CTGTTCAGGAATTTTTCCCCTGTTTTTTATCTTAGAGGCTTTTCCCCACT
TTCTCCTCTATAAATTTCAGAGTCTCTGGTTTTATGTGGAGGTCTTTGAT
CCACTTAGACTAGACCTTTGTACAAAAAGACAAGAATGGATCAATTCGCA
TTCTTCTACATGATAACTGCCAGATGTGCCAGCACCATTTGTTGAAAATG
CTATCTTTTTTCCAGTGGATGGTTTTACCTCTATTGTCAAACATCAAGTG
ACAATAGGTGGGTAGGTTGATTTCTGGGTCTTCAATTCTATTCCATTGAT
CTACCTGTCTGTTGCTGTACCAGTACCATGCAGTTTTTATCACAATTGCT
CTGTATTACAGCTTGAGGTAAGGCATAATGATTACACCAGAGGTTCTTTA
ATTGTTGAGAATAGTTTTTG

ATTACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTACCTAGAACAAGGCCTGAAATCAA
CTGAATCTCAGGAGGGTGTTTGGCATATAAGTAGGTGTGTCAGTAATGGG
GTGGTTATTGATCCATTTCCTTGGCACACTTTCAGCATGTTATTTTTGGT
TGTAGAATAAAAAAGACTTTCTCTTTTTCACAAGGCATCACTGACTTTTC
CTCAGTAAGGGAAGCAACTACTATCTACATCAAAGGGGTTTATCAAGCAC
AGGCCTAACCATTTGTAATTGGAATTAATGACCATCAATCATAAGATTTC
TGACACAGGATGGTGCCATACTGGTACTCACATGTCTCAAAGGGAGACAT
CTGCTTTCTCTGTCAGGAAGGCTGTTACTGACTATAACATTTATGCCAGG
AGAATCTGGCATATATATGTGAATTTACTAGAAAGCCCAGGAAGCAAGCA
GCTGCAGATGGCAAGTTTTATTCTCTTCTTCCCTGACTAGCCTCTCCATT
ACCCCAATAGTACACTGTGATTAAATCTTGCTTTCCAGGGTAGTACTGCC
TGGAGATAGATACAATTTCAGGGAGTAGATGCTGATGGTAAATCCTTAAA
TAAGTGTTTGGGGGCTGTGCCCTGTTAAGGATTTGTCAGACTCAAGTGTT
CCCAGTCTGACTTCATGTTTGGCAGATATAAGTCATTCCATACTGTGCCN

Query= MSMg01no486_c13.g1 MSMg01no486_c13.g1 CHROMAT_FILE:
MSMg01no486_c13.g1 PHD_FILE: MSMg01no486_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:23 2005
         (648 letters)



>mm_chr9_12018437_12019484
          Length = 1048

 Score = 1214 bits (628), Expect = 0.0
 Identities = 643/648 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacctagaacaaggcctgaaatcaactgaatctcaggagggtgtttggcatataagtag 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacctagaacaaggtctgaaatcaactgaatctcaggagggtgtttggcatataagtag 260

                                                                       
Query: 61  gtgtgtcagtaatggggtggttattgatccatttccttggcacactttcagcatgttatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gtgtgtcagtaatggggtggttattgatccatttccttggcacactttcagcatgttctt 320

                                                                       
Query: 121 tttggttgtagaataaaaaagactttctctttttcacaaggcatcactgacttttcctca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttggttgtagaataaaaaagactttctctttttcacaaggcatcactgacttttcctca 380

                                                                       
Query: 181 gtaagggaagcaactactatctacatcaaaggggtttatcaagcacaggcctaaccattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaagggaagcaactactatctacatcaaaggggtttatcaagcacaggcctaaccattt 440

                                                                       
Query: 241 gtaattggaattaatgaccatcaatcataagatttctgacacaggatggtgccatactgg 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaaatggaattaatgaccatcaatcataagatttctgacacaggatggtgccatactgg 500

                                                                       
Query: 301 tactcacatgtctcaaagggagacatctgctttctctgtcaggaaggctgttactgacta 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 tactcacatgtctcaaagggagacatctgctttctctgtcaggaaggttgttactgacta 560

                                                                       
Query: 361 taacatttatgccaggagaatctggcatatatatgtgaatttactagaaagcccaggaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taacatttatgccaggagaatctggcatatatatgtgaatttactagaaagcccaggaag 620

                                                                       
Query: 421 caagcagctgcagatggcaagttttattctcttcttccctgactagcctctccattaccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagcagctgcagatggcaagttttattctcttcttccctgactagcctctccattaccc 680

                                                                       
Query: 481 caatagtacactgtgattaaatcttgctttccagggtagtactgcctggagatagataca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caatagtacactgtgattaaatcttgctttccagggtagtactgcctggagatagataca 740

                                                                       
Query: 541 atttcagggagtagatgctgatggtaaatccttaaataagtgtttgggggctgtgccctg 600
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 741 atttcagggagtagatgctgatggtaaatccttaaataagtctttgggggctgtgccctg 800

                                                           
Query: 601 ttaaggatttgtcagactcaagtgttcccagtctgacttcatgtttgg 648
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttaaggatttgtcagactcaagtgttcccagtctgacttcatgtttgg 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)