Query= MSMg01no487_n03.b1 MSMg01no487_n03.b1 CHROMAT_FILE:
MSMg01no487_n03.b1 PHD_FILE: MSMg01no487_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:32 2005
(659 letters)
>mm_chr9_61705146_61706204
Length = 1059
Score = 1050 bits (543), Expect = 0.0
Identities = 614/655 (93%), Gaps = 27/655 (4%)
Strand = Plus / Plus
Query: 5 gaattcggagactttggtactgccattgtcaccaattcgaagctgtcttgggagtttccc 64
|||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattcggagaccttggtactgccattgtcaccaatttgaagctgtcttgggagtttccc 264
Query: 65 accattgccaacaaggagataacatctctcaggaatccctgtataactgagagactcaga 124
| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||
Sbjct: 265 atcattgccaaccaggagataatatctctcaggaacccctgtataactgagagactgaga 324
Query: 125 cacccagtcctatctttctagctccatgggggagggggaagacacctagcagaggctggc 184
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 tacccagtcctatctttctagctccatgggggagggggaggacacctagcagaggctggc 384
Query: 185 tacggatgtagctcagttatgctctcctaacatggacaaagccccaggtctgtccccagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacggatgtagctcagttatgctctcctaacatggacaaagccccaggtctgtccccagc 444
Query: 245 acagtatcaaactagggatgatggcacggagcagtaatcccagcactgaaagggtagata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagtatcaaactagggatgatggcacggagcagtaatcccagcactgaaagggtagata 504
Query: 305 aaggatggtcagaagttcaaggtcagccttggctacatactaagttggagtccagcctgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaggatggtcagaagttcaaggtcagccttggctacatactaagttggagtccagcctgg 564
Query: 365 gctagaggacaacctaggcctggatcctgctcccacaccccaaaaagagaaaaaggaata 424
||||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 565 gctagaggagaaccgaggcctggatcctgcccccacaccccagaaagagaaaaaggaag- 623
Query: 425 cacacacacacacacacacacacacacacacacacacacacacacacacacagtggtgaa 484
||||||||||||||||||||||||||||||||||
Sbjct: 624 --------------------------cacacacacacacacacacacacacagtggtgaa 657
Query: 485 gctgaaagccagccagaagccacagaaggcaaaaggcaagagatgcgatttaatgactta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gctgaaagccagccagaagccacagaaggcaaaaggcaagagatgcgatttaatgactta 717
Query: 545 gtgacctcacgtcagcggcagccacttatgagtgctggtgggttatttccctcttgaact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gtgacctcacgtcagcggcagccacttatgagtgctggtgggttatttccctcttgaact 777
Query: 605 aactggtcttgaactctcaggtttccctgctgatttgcccagatcattctggaac 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aactggtcttgaactctcaggtttccctgctgatttgcccagatcattctggaac 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_n03.g1 MSMg01no487_n03.g1 CHROMAT_FILE:
MSMg01no487_n03.g1 PHD_FILE: MSMg01no487_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:32 2005
(661 letters)
>mm_chr9_61744322_61745382
Length = 1061
Score = 694 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Minus
Query: 303 cttagtttcatatttgaaaacttttgtttttaatattttgatttgttttgtttcagcaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 cttagtttcatatttgaaaacttttgtttttaatattttgatttgttttgtttcagcaag 1002
Query: 363 gaaaaatttatctgagacagactttcatatattccagactggcctcagactcactatgta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 gaaaaatttatctgagacagactttcatatattccagactggcctcagactcactatgta 942
Query: 423 gctgaagataaccttgaagttctgatcctcctgcctctacttctagagttttggagtcat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 gctgaagataaccttgaagttctgatcctcctgcctctacttctagagttttggagtcat 882
Query: 483 gggtattagtcaccataccccacttttctattatttttcaagggggaaaattatattgta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 gggtattagtcaccataccccacttttctattatttttcaagggggaaaattatattgta 822
Query: 543 acttgtcagggcaagtctcttaaccaatattctaaaatctaggaaaaacagaccagcgtg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 acttgtcagggcaagtctcttaaccaatattctaaaatctaggaaaaacagaccagcgtg 762
Query: 603 tttatatgcgctacacacaatcatgtccggctgtaaaaagcttatggctttgcttcctg 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tttatatgcgctacacacaatcatgtccggctgtaaaaagcttatggctttgcttcctg 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
