Query= MSMg01no488_p17.b1 MSMg01no488_p17.b1 CHROMAT_FILE:
MSMg01no488_p17.b1 PHD_FILE: MSMg01no488_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:03 2005
(628 letters)
>mm_chr9_36767942_36768970
Length = 1029
Score = 795 bits (411), Expect = 0.0
Identities = 435/445 (97%), Gaps = 5/445 (1%)
Strand = Plus / Minus
Query: 189 agctagcggggcgcaggttttaaagtgcatggattgtattaatagcaactgccatgctga 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 agctagcggggcgcaggttttaaagtgcatggattgtattaatagcaactgccatgctga 970
Query: 249 ggcctattaaattccagctgctgtgccatgcatgacctcatttccctcttgccacttcta 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ggcctattaaattccagctgctgtgccatgcatgacctcatttccctcttgccacttcta 910
Query: 309 actgtaggcataaaaaactattcccattttacagactagcatcagaaaggttgaaaattt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 actgtaggcataaaaaactattcccattttacagactagcatcagaaaggttgaaaattt 850
Query: 369 tgtccaagtctc----acagacagacagacagatgtaaagaagatgcccacct-tgccta 423
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 849 tgtccaagtctcacagacagacagacagacagatgtaaagaagatgcccacctctgccta 790
Query: 424 tctgactgagatctatcagctccacatcttgacagggtgtccactgctccaatcagtatt 483
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 789 tctgactgagatctatcagctccagatcttgacagggtgtccactgctccaatcagtatt 730
Query: 484 tgcccacagattatagacctcactgttatgacccaaggtattggggtcggctagaaaggt 543
|||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 729 tgcccacagattgtagacctcactgttatgacccaaggtattggagtcagctagaaaggt 670
Query: 544 accattcattgtatgggaagtactgtctgctccacatcagatcctcctgcattccgtaga 603
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 669 accattcattgtatgggaagtactgtctgttccacatcagatcctcctgcattccgtaga 610
Query: 604 gtttggatcatctctgtttcggaca 628
|||||||||||||||||||||||||
Sbjct: 609 gtttggatcatctctgtttcggaca 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space: 629742
Effective search space used: 629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_p17.g1 MSMg01no488_p17.g1 CHROMAT_FILE:
MSMg01no488_p17.g1 PHD_FILE: MSMg01no488_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:03 2005
(370 letters)
>mm_chr9_36602048_36602817
Length = 770
Score = 692 bits (358), Expect = 0.0
Identities = 367/370 (99%)
Strand = Plus / Plus
Query: 1 ccatggctcattcacatgtaaatgcaaggtcatgcaaacagatgcaaacagacaataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccatggctcattcacatgtaaatgcaaggtcatgcaaacagatgcaaacagacaataaat 260
Query: 61 gttgaaaagaactggtagagaaaaaaaaagtacaattcagtggtggagtgcttgcacggt 120
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gttgaaaagaactgatagagaaaaaaaaagtacaattcagtggtagagtgcttgcacggt 320
Query: 121 atattccattcccaacaccaagagaaattaaactgagactgagggctggtgatgaaatcc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgttccattcccaacaccaagagaaattaaactgagactgagggctggtgatgaaatcc 380
Query: 181 tagcatcccagctgcctggcaggctaagataggcacaagttcaaggtctacacaagctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcatcccagctgcctggcaggctaagataggcacaagttcaaggtctacacaagctga 440
Query: 241 attaattaacaactggataatttaaaaaactctctcaaaaacaaaacaaaacattgggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attaattaacaactggataatttaaaaaactctctcaaaaacaaaacaaaacattgggaa 500
Query: 301 tatagtttagtagagaacctgcctcgcatacacagtctctagtaccaaaatgataagagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatagtttagtagagaacctgcctcgcatacacagtctctagtaccaaaatgataagagg 560
Query: 361 gttcatacta 370
||||||||||
Sbjct: 561 gttcatacta 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
