ATATTCACCATACTCCCAAATCTTGAAAGAAATAGAAAGAATTTCCTCTT
TTCCACAAAGGAGAGGGGCTGGAGATTTTCCCTTTTCACCCAATAAGAAG
GACGCGGTTCCAGCTTGCCTTTTTGCGCCTATTATGCACCGCTTAGATTG
GCATTTCTATGAGCTACCCCCGCGCCCACCCGACCTCTCGCCTCATCGCG
CGGCCCTACCCTTAATCTATGACTATGAGAGCACCCACTAGCTCACTATA
TGCGTATACAGTGTTCTACGATTGATACGCGAATTCACAATGGCGAGAGG
CTCAGTATATTGCTCCTTATTCACGCATCGAGCCCCACTTATGGAGTACA
CTTGACTTGATAGATAGGTCTAGCCTAACGCCGATTATAGCAAGCCGCCT
CAGGCGAGTACTAGAATCCAAATCATGTAGCTCACCATCTGCGAGTGGTG
AGCCAGCACCTGTAGCCTCCGCTCTGGCTATAATGTATTGTCCCTACTGC
AACACTTTATATTTGTGATATGGTCTTTTTTAATGGTTGAGCAATCGCCA
AGTCACTATGCTACGTTATTACAAACCCCATTAGTGTGCTGGCTTTATAT
TGTAACAGCAACATATAGCTAGTACTGATCGCTTACATCGTGTGTGCACT
TGTCGAATTCGTCCGACCAATACACTCTTCGTTGGCCTCGCGCCTAGTGC
GGCGCGGTATGTGCTATACACTATACTGTGTCCTCACATGAGCGTACGCG
AAACCTCGACTCGATCCTATTCCTGCCTGCTTAATAGGCAACATAGCACA
GGTCGACGATCTGACCATATGAAATACCTATGCCCGATAAACCATCTTAG
GGAATGGTGTTTACATGTCCGCATCCTCTTTAACTAACAGCCTAAGACCA
TCTGTTCGATAGTGGAAGCACGACGCCCCTATTTTTGTCATTATAGACGA
GGCCCACTCGCTCCTAATTAATGAACACAGAGGATCTTCCTCCAAGACAT
TATGTGCTATAGGAGCTCGGACGACGTCATCACCCTCACTCTTCCATCAT
ACTTGTCTATTGTN

TTAAANNCCCTATGAAGTGNGTAGGCCTGGNGGCCGCCTGTTTTCAAAAT
GGGGGTNGAACTATAGAAGTACAAAAAGAAAGCTTTTNAANTTCTACTCA
TATAAGTTGATGCTCATTAGATGGGTCATAAATTACCTATCAAGTATTAG
AGCATGTTTCTGAAAGATATAGTGGGGGCTCTTATAGTGATTTGGCTCAC
CAAACCCTTCATGGCTTTCTGCTGTGTGAACTTTCTCTCAACATTACTGA
GACAGTTTGACCCTGTTGCTCTCTTGTTATCCTTCCTACCAAGTCTAGAA
TTCAGTCCCTAAGGTACTGTGTTTTANTACAGTATGACAAGGATTGTTTG
TTTTTCATGTATATATATATATATGTATATATATATATATATATATATAT
ACAATGCTTCCTCAGAGGGCTCGACAGTCATTTGTCAATTCATTCTGTCA
GTAATTATCTGCTGACTCTGCAAATGGCAGCTTGGTAAAGGACAGTCTAC
AGAAGAGATAGAGAAACCAACGAATAGCTTGGCTTCTGCTCTAGAAATGG
GTTTCTTTAAATTTGCATATGGTTAAAGTCATGCTCCGTCTATACTCTCT
CACATGAAAATTCTTCGTGTCACTCAACTTATAATTTTGTTACCTCATAA
GTGTTTTTAATTTTCTTAAGAAAAATGAAAATATATAATTAGGAGAAGAG
CTAATTCCCTGGGGCGACTN

Query= MSMg01no489_i14.g1 MSMg01no489_i14.g1 CHROMAT_FILE:
MSMg01no489_i14.g1 PHD_FILE: MSMg01no489_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:48 2005
         (627 letters)



>mm_chr9_86720275_86721301
          Length = 1027

 Score = 1143 bits (591), Expect = 0.0
 Identities = 620/632 (98%), Gaps = 5/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttctactcatataagttgatgctcattagatgggtcataaattacctatcaagtattaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttctactcatataagttgatgctcattagatgggtcataaattacctatcaagtattaga 255

                                                                       
Query: 61  gcatgtttctgaaagatatagtgggggctcttatagtgatttggctcaccaaacccttca 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcatgtttctgaaagataaagtgggggctcttatagtgatttggctcaccaaacccttca 315

                                                                       
Query: 121 tggctttctgctgtgtgaactttctctcaacattactgagacagtttgaccctgttgctc 180
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 316 tggctttctgctgtgtgaactttctctcaacattactgagacagcatgaccctgttgctc 375

                                                                       
Query: 181 tcttgttatccttcctaccaagtctagaattcagtccctaaggtactgtgtttt-antac 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 376 tcttgttatccttcctaccaagtctagaattcagtccctaaggtactgtgttttaattac 435

                                                                       
Query: 240 agtatgacaaggattgtttgtttttcatgtata----tatatatatatgtatatatatat 295
           |||||||||||||||||||||||||||||||||    ||| | ||||| |||||||||||
Sbjct: 436 agtatgacaaggattgtttgtttttcatgtatatgtgtatgtgtatatatatatatatat 495

                                                                       
Query: 296 atatatatatatatacaatgcttcctcagagggctcgacagtcatttgtcaattcattct 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atatatatatatatacaatgcttcctcagagggctcgacagtcatttgtcaattcattct 555

                                                                       
Query: 356 gtcagtaattatctgctgactctgcaaatggcagcttggtaaaggacagtctacagaaga 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtcagtaattatctgctgactctgcaaatggcagcttggtaaaggacagtctacagaaga 615

                                                                       
Query: 416 gatagagaaaccaacgaatagcttggcttctgctctagaaatgggtttctttaaatttgc 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gatagagaaaccaacgaatagcttggcttctgctctagaaatgggtttctttaaatttgc 675

                                                                       
Query: 476 atatggttaaagtcatgctccgtctatactctctcacatgaaaattcttcgtgtcactca 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 atatggttaaagtcatgctccgtctatactctctcacatgaaaattcttcgtgtcactca 735

                                                                       
Query: 536 acttataattttgttacctcataagtgtttttaattttcttaagaaaaatgaaaatatat 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 acttataattttgttacctcataagtgtttttaattttcttaagaaaaatgaaaatatat 795

                                           
Query: 596 aattaggagaagagctaattccctggggcgac 627
           ||||||||||||||||||||||||||||||||
Sbjct: 796 aattaggagaagagctaattccctggggcgac 827



 Score = 58.7 bits (30), Expect = 1e-12
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 279 tatatgtatatatatatatatatatatatataca 312
           ||||| ||||||||||||||||||||||||||||
Sbjct: 510 tatatatatatatatatatatatatatatataca 477



 Score = 54.9 bits (28), Expect = 2e-11
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 283 tgtatatatatatatatatatatatata 310
           ||||||||||||||||||||||||||||
Sbjct: 512 tgtatatatatatatatatatatatata 485


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)