NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCTGATTTTCTCAAAACTTTTATCATGAATGGGTGTTGGATCTT
GTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTT
TGAGTTTGTTTATATAATGGATTACATTGATGGATTTTCGTATATTAAAC
CATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGC
TTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTG
CATCGATATTCATAAGAGTTATTGGTCTGAAGTTCTCTATCTTTGTTGGA
TCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTT
GGGTAGAGTACCTTCTACTTCTATTTTGTGAAATAGTTTGTGCAGAATTG
GAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCATCT
GGTCCTGGGCTTTTTTTGATTGGGAGACTATTAATAACTGCTTCTATTTC
TTTAGGTGATATGGGACTGTTTAGTTGGTCAACTTGATCCTGATTCAACT
TTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTTTCC
AGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGGAT
TTCTTCAGGATCTGTTGTTATGTCTCCCTTTTCATTTCTGAATTTGGTAA
TTAGGAT

TTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTACTCTACAAAATTGCCA
CTTGTAAGAATAAAATTGAAACTCAAAGATTTAATACATAACTTATAGAC
AGTGAAATTCACAAAGTTGCAAGTATTCATCTTATATTTTGCACTACTGT
AATCACAAAATGTATAAAGGTGTCATGTGTATTTTGCAACTAATAACTTG
TGTGATGATGAATCAAGATTGAATGATGCTAAAGAAAAGCACTGCTTATA
AAATATCAACCACTCTGGAAATCAATCTTGTGGTTCCTCAGAAAATTGGA
CATAGTACTACCAGAGGATCCCGCAATACCTCTCCTGGGCATATATCCAG
AAGATGTCCCAACCGGTAAGAAGGACACATGCACCAGTATGTTCATAGCA
GCCTTATTTATAATAGCCAGAAGCTGGGAAGAACCCAGATGCCCCTCAAC
AGAGGAATGGATACAGAAAATGTGGTACATTTACACAACGGAGTACTACT
CAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGAC
CTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGAACTCACA
CAATATGTACTCACTGATAAGTGGATATTAGCCCAGAAAATTAGGATACC
CAAGATATAAGATANCATTTGCTTAACGCATGAAACTCAAGAAGAACGAA
GATCAAAGTGTGGACACTTTGCCCCTTN

Query= MSMg01no490_g14.g1 MSMg01no490_g14.g1 CHROMAT_FILE:
MSMg01no490_g14.g1 PHD_FILE: MSMg01no490_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:00 2005
         (593 letters)



>mm_chr9_80908116_80909108
          Length = 993

 Score = 1031 bits (533), Expect = 0.0
 Identities = 578/593 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctactctacaaaattgccacttgtaagaataaaattgaaactcaaagatttaatacat 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctactctacaaaattgccacttataagaataaaattgaaactcaaagatttaatacat 260

                                                                       
Query: 61  aacttatagacagtgaaattcacaaagttgcaagtattcatcttatattttgcactactg 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 aacttatagacagtgaaattcacaaagttgcaagtattcatcttacattttgcactactg 320

                                                                       
Query: 121 taatcacaaaatgtataaaggtgtcatgtgtattttgcaactaataacttgtgtgatgat 180
           ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 taatcacaaaatgtataaaagtgtcatgcgtattttgcaactaataacttgtgtgatgat 380

                                                                       
Query: 181 gaatcaagattgaatgatgctaaagaaaagcactgcttataaaatatcaaccactctgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatcaagattgaatgatgctaaagaaaagcactgcttataaaatatcaaccactctgga 440

                                                                       
Query: 241 aatcaatcttgtggttcctcagaaaattggacatagtactaccagaggatcccgcaatac 300
           ||||  ||| | |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 aatccgtctggcggttcctcagaaaattggacatagtactaccagaggatcctgcaatac 500

                                                                       
Query: 301 ctctcctgggcatatatccagaagatgtcccaaccggtaagaaggacacatgcaccagta 360
           |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 501 ctctcctgggcatatatccagaagatgtcccaaccggtaagaaggacagatgcgccagta 560

                                                                       
Query: 361 tgttcatagcagccttatttataatagccagaagctgggaagaacccagatgcccctcaa 420
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 tgttcatagcagccttatttataatagccagaagctggaaagaacccagatgcccctcaa 620

                                                                       
Query: 421 cagaggaatggatacagaaaatgtggtacatttacacaacggagtactactcagctatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagaggaatggatacagaaaatgtggtacatttacacaacggagtactactcagctatta 680

                                                                       
Query: 481 aaaagaatgaatttatgaaattcctaggcaaatggatggacctggagggcatcatcctga 540
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 aaaagaatgaatttatgaaattcctagccaaatggatggacctggagggcatcatcctga 740

                                                                
Query: 541 gtgaggtaacccaatcacaaaggaactcacacaatatgtactcactgataagt 593
           |||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgaggtaacacattcacaaaggaactcacacaatatgtactcactgataagt 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)