Query= MSMg01no490_i10.b1 MSMg01no490_i10.b1 CHROMAT_FILE:
MSMg01no490_i10.b1 PHD_FILE: MSMg01no490_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:08 2005
(663 letters)
>mm_chr9_118094083_118095145
Length = 1063
Score = 1220 bits (631), Expect = 0.0
Identities = 655/667 (98%), Gaps = 8/667 (1%)
Strand = Plus / Minus
Query: 1 caatgtggcctcttcatgtgtccatcaaatagctcaaggcatcagaaaagtgtttgtctt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 863 caatgtggcctcttcatgtgtccatcaaatagctcaagacatcagaaaagtgtttgtctt 804
Query: 61 gccttcttactcacagtgggtaagtgggcccactggattcagcaagtgttggagtagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gccttcttactcacagtgggtaagtgggcccactggattcagcaagtgttggagtagtta 744
Query: 121 ctccaggcaaccctgcccatgtgccacgggaagcccaaggtgaatccagtagacatccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctccaggcaaccctgcccatgtgccacgggaagcccaaggtgaatccagtagacatccag 684
Query: 181 ttgtttgcatataactcggatattttctttgatgtccatggccagccgcagaattgg--- 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttgtttgcatataactcggatattttctttgatgtccatggccagccgcagaattgggca 624
Query: 238 -ttttatgacttgtggttgccaatcaacatgcccctcccccttacaaggctgtaggctta 296
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 c----atgactcgtggttgccaatcaacatgcccctcccccttacaaggctgtaggctta 568
Query: 297 tggccaattatccaagataaacccatttgctttccctctgcagctttagagtcgtattta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tggccaattatccaagataaacccatttgctttccctctgcagctttagagtcgtattta 508
Query: 357 ttattcaggataaggtgtcatttcaaaagcataaagggcatatttttcacttaagtgttt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttattcaggataaggtgtcatttcaaaagcataaagggcatatttttcacttaagtgttt 448
Query: 417 ccttcattatcaaacaccatttgagaaggagctgagctgagaggcgaggagacggtgagg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccttcattatcaaacaccatttgagaaggagctgagctgagaggcgaggagacggtgagg 388
Query: 477 gtctggcctaaccctgctgactgtcttagtctcctgctcatctcgcgtggcatgagctct 536
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 387 gtctggcctaaccctgctgactgtcttagtctcctggtcatctcgcatggcatgagctct 328
Query: 537 gacgcaagcctttgcacctgcatgagcttccactattatgctcgagaagtgtctcagtca 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gacgcaagcctttgcacctgcatgagcttccactattatgctcgagaagtgtctcagtca 268
Query: 597 cagggaagatgtgtgtgtacccaaacacaaagcataaagtaatgcattttaagtgaatgt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cagggaagatgtgtgtgtacccaaacacaaagcataaagtaatgcattttaagtgaatgt 208
Query: 657 gcagtgc 663
|||||||
Sbjct: 207 gcagtgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_i10.g1 MSMg01no490_i10.g1 CHROMAT_FILE:
MSMg01no490_i10.g1 PHD_FILE: MSMg01no490_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:08 2005
(284 letters)
>mm_chr9_117964686_117965369
Length = 684
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 1 aaaaaaattgaaataattcctgttgtttcctttttaaacacatgacagggtccacctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaaaattgaaataattcctgttgtttcctttttaaacacatgacagggtccacctcag 260
Query: 61 gaagacattctgcagggcagagatgtcatcaggccgagcttgtcgagagaagagcatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagacattctgcagggcagagatgtcatcaggccgagcttgtcgagagaagagcatgtt 320
Query: 121 ccacaccagggtcttcaccacaggtctcctgagttcctaattccaccttcctaatatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacaccagggtcttcaccacaggtctcctgagttcctaattccaccttcctaatatggt 380
Query: 181 ttaacttggggggagggagcattctgtatgcaactgtgacctcggataactgtatattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaacttggggggagggagcattctgtatgcaactgtgacctcggataactgtatattta 440
Query: 241 taaaagtgagagaaaaaggaaaggaaagagagggagggaggaag 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaagtgagagaaaaaggaaaggaaagagagggagggaggaag 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
