NCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATGCGCG
GAATTGTAACTGCTTTTCTTGAGTTATTATAAAGAAGACGTGGAGCAGAT
TATTATTATATATAACAGGCAGAATGTGTAGGAAAATATTCCCCTATCCC
TCTTTTCCCCCCAGGCCCCTAAAGGTTGTGGCATGGGTGCAGGCAACCTG
AGTCCCTGTTCTCTTTTGTCTTATATCTACTGAGACTGGCTTCCAGGAGC
AGGGGCCCCTCTAACTCTGCCCACTCTGCTGCCTGGAAAGCAGCCACAGG
GATATTGGCCTGACTCTGGCACTCTACCTAGGGATGCTGGTGGCACATGC
TGAGTTTCTGTGTATCTCCTGCTTGTTTCTCAGCAGCTGCCTCGGGCAGG
CATGAAGAGTGCTCCTAGACAGTTGGATGGGATCCAAGAAGTAGCCCCTT
CCTCTGCAGGTGACAGATAAGCTTGTGTAGGTCATGGCCCAGGGGTCCCC
CAGACTGGCCTACCAGATGGACATGTTAAGCCTTCTCAAATACTTAGTCA
CACTGCAACCTAGTCTGGACACCCAGATCAGTACCACAAATAAAGATTGG
AGAAAAGGCTCACTGGATAGAGTGCCAGCTTAGCAGGCAGGAGGGCTGGG
CTCAACAGCCAGAACCACATAAAGTGAGCATGGTGGGACACACTTGCAGT
CCTGGGGGACAGGAGGAGGAGCAGTACA

CCATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTGAAATTCAGCTGTTCACCCCACAACATGGGTGTGGAG
GTCAAAGATCAATGTCCAGGGGTATGTGAGTGTCTGTGTGTGTATGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGNGNNNNNNNNNNNNNNNNNNNNNT
NNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNCNCTTTC
CTTTNNNNNTTTTTTTTCCCCCCCCCCCTCCCCCTCCCCCCCCCCNCCCC
CCCCCCCNCCTTTCCTCCCTTTCCNCCCCCCCCCCCCCCCCCCCNCCCNC
CCTCTTCTCCCCCCCTCCCCCCCCCCTCTTCCTCTCCCCCCCTTTTCCCC
CTTCTCCTTCCTCCCCCCCCCCCCTTCTTCTCCCTCCTCCTCCCCCCCCC
CCCTCCTCTTCCCCCCCCCCCCCCCCCCCCCTCCCCTTTCTCCCCCCTCC
TCTTCCCTTCCCCCCACCCCTTTCCCCCTCCCTNCCCCTCAACCCATCCC
CTCCTCCCCCCCCCCTCCCCTCCACTCTCCACACCATCCCCCCCCCCTCC
CCACTCTATCTCCCCCCCCCACATCCCCCTCTACCCTCCTCCCTCCTTCT
CCTTCTCCCCCCCCTCCCCATCTACTCACACCTCTCCCCCCCTCTTTCCC
AACCCCCCCCCACCCCCACACATCTATTCTCCTTTCTTCTCTCCCTCCCC
TCCTTTCTCTCCCTTCCCCATCACTCCCCCCCTCTTTCTCTCCTCTTCCC
CTCTCTCCACCACCTCCTACCCGCACCACATCT

Query= MSMg01no493_d13.b1 MSMg01no493_d13.b1 CHROMAT_FILE:
MSMg01no493_d13.b1 PHD_FILE: MSMg01no493_d13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:40 2005
         (665 letters)



>mm_chr9_60914006_60915072
          Length = 1067

 Score = 1199 bits (620), Expect = 0.0
 Identities = 652/664 (98%), Gaps = 4/664 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   aattgtaactgcttttcttgagttattataaagaagacgtggagcagattattattatat 64
           |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 205 aattgtaactgc-tttcttgagttatcataaagaagacatggagcagattattattatat 263

                                                                       
Query: 65  ataacaggcagaatgtgtaggaaaatattcccctatccctcttttccccccaggccccta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ataacaggcagaatgtgtaggaaaatattcccctatccctcttttccccccaggccccta 323

                                                                       
Query: 125 aaggttgtggcatgggtgcaggcaacctgagtccctgttctcttttgtcttatatctact 184
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 324 aaggttgtggcatgggtgcaggcaacccgagtccctgttctcttttgtcttatatctact 383

                                                                       
Query: 185 gagactggcttccaggagcaggggcccctctaactctgcccactctgctgcctggaaagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagactggcttccaggagcaggggcccctctaactctgcccactctgctgcctggaaagc 443

                                                                       
Query: 245 agccacagggatattggcctgactctggcactctacctagggatgctggtggcacatgct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agccacagggatattggcctgactctggcactctacctagggatgctggtggcacatgct 503

                                                                       
Query: 305 gagtttctgtgtatctcctgcttgtttctcagcagctgcctcgggcaggcatgaagagtg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagtttctgtgtatctcctgcttgtttctcagcagctgcctcgggcaggcatgaagagtg 563

                                                                       
Query: 365 ctcctagacagttggatgggatccaagaagtagccccttcctctgcaggtgacagataag 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 564 ctcctagacagttggatgggatccaagaagtagccccttcctctgcaggtgacagacaag 623

                                                                       
Query: 425 cttgtgtaggtcatggcccaggggtcccccagactggcctaccagatggacatgttaagc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttgtgtaggtcatggcccaggggtcccccagactggcctaccagatggacatgttaagc 683

                                                                       
Query: 485 cttctcaaatacttagtcacactgcaacctagtctggacacccagatcag---taccaca 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||
Sbjct: 684 cttctcaaatacttagtcacactgcaacctagtctggacacccagatcagaagtacccca 743

                                                                       
Query: 542 aataaagattggagaaaaggctcactggatagagtgccagcttagcaggcaggagggctg 601
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 744 aataaagattggagaaaaggctcactggatagagtgccagcttatcaggcaggaggcctg 803

                                                                       
Query: 602 ggctcaacagccagaaccacataaagtgagcatggtgggacacacttgcagtcctggggg 661
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 804 ggctcaacagccagaaccacataaagtgatcatggtgggacacacttgcagtcctggggg 863

               
Query: 662 acag 665
           ||||
Sbjct: 864 acag 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1067
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1057
Effective search space:   692335
Effective search space used:   692335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)