TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCCGCGG
AATTCAGGACTACCTTCTCAGAGATGTTGACACCTACCTTGAGCTGGGCT
TTTGCATTAATCACTAATTGAGAAAATGCCTTACAGCTGAGTCTCATAGA
GGAGATAGTACCCACATCTCTGGTACCTTCTAGGCACACAACTTTTACTT
CAATGGTGCTAAACCCTGATAGAATAGTGGAAATAGCTGGTGGGCAATGA
AGCTTGATTTGGGATAATGGAAGAAAATTACACATTAGCTCTCTCTGTTC
CAAAACTGTACACTTTCATTTTCTTTGCTATTTGTAATTTACCTTCAAAA
CACATGCCCATTGGTGAAGTGAGAAAGAATGCAGACATTTAAGACAAGCT
CAGCTGTCACCAACCACTAGAAATAACCTAGCTGAATAATTACATATGTG
TCATATACAACTTTCCTTATGGTCTTATGAATTTACAGAAAATCACTTTA
AACATATTGACTTGCCCCAGCCCCACTTAGCATTAGAAGCTCATGCTGTA
CCCAGTCTTTATCACAAAAGTGGTTTTGTTTGCTTGTTTGTTTGTTTGTT
TGTTTTTAACTGCAGAAACCCATAGCTGGCCAATGCATCATGAATGAGAT
AGAGTGGAGAACTCAGAGATCTATATCACAAGGCTCAGGGAGCATTTTGG
AAGAGGGGGAAGACAGAATGCAAGGGCTGAA

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAACTCTCTAGTTTGTGTACTGGGTCCTC
TATGGAAGAGTTAGGGGAGAGACTGAAGGAGCTGAAGGGGATTGCAACCC
CATAGGAAGAACAACAATATAAACTAACTGGACACCCCAGAGTTCCCAGG
GACTAAACCACCAACCAAAGAATGCAAATGGTTCCAGATATATATGTAGC
AGAAGATGGCCTTGTCTGACATCAATGGGAGGAGAGGCCCTTGGTTCTGT
AAAAGCTCAGTGCCCCAGTGTATGGAGACTCTAGGACAGTGAGACAGGAG
TGGGTGGGTGGTTGGGGAGCACCCTCATAGAAGTAGGGGAGGGGGATGGG
ATGGGAAGTTTGCANANNNNAAACCTGNAANGAAAACATCATTTGAAATG
TAAATAAATAAAACAACTAATAAAAAAAGTTCCGGTATTTTTAAATTTCT
GTCTGGTTTTCTTCTATTCCTTGGGGTTTTGTATCTTGCTCTTTATTTTC
TAGGTCTTTAAGATGCACCATTGTATTGCTCACATGAAATCATTGTGTTT
TTCAATTTATCCCTTATGGCTGTAGCTACCCTCTTAGTGGTGGTCTTACT
ATGTCCCTTGGGGTTTAATTTGCAGGATTACCATTTAACTTGAATCCAGA
AAGATTTATTGCACTTTTGATGTTGTAGTGATTTGCCCACCCGTTCCT

Query= MSMg01no493_k21.b1 MSMg01no493_k21.b1 CHROMAT_FILE:
MSMg01no493_k21.b1 PHD_FILE: MSMg01no493_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:19 2005
         (683 letters)



>mm_chr9_93991330_93992412
          Length = 1083

 Score = 1272 bits (658), Expect = 0.0
 Identities = 673/680 (98%), Gaps = 4/680 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattcaggactaccttctcagagatgttgacacctaccttgagctgggcttttgcatta 63
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gaattcaggactaccaactcagagatgttgacacctaccttgagctgggcttttgcatta 772

                                                                       
Query: 64  atcactaattgagaaaatgccttacagctgagtctcatagaggagatagtacccacatct 123
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 771 atcactaattgagaaaatgccttagagctgagtctcatagaggagatagtacccacatct 712

                                                                       
Query: 124 ctggtaccttctaggcacacaacttttacttcaatggtgctaaaccctgatagaatagtg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ctggtaccttctaggcacacaacttttacttcaatggtgctaaaccctgatagaatagtg 652

                                                                       
Query: 184 gaaatagctggtgggcaatgaagcttgatttgggataatggaagaaaattacacattagc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gaaatagctggtgggcaatgaagcttgatttgggataatggaagaaaattacacattagc 592

                                                                       
Query: 244 tctctctgttccaaaactgtacactttcattttctttgctatttgtaatttaccttcaaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tctctctgttccaaaactgtacactttcattttctttgctatttgtaatttaccttcaaa 532

                                                                       
Query: 304 acacatgcccattggtgaagtgagaaagaatgcagacatttaagacaagctcagctgtca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 acacatgcccattggtgaagtgagaaagaatgcagacatttaagacaagctcagctgtca 472

                                                                       
Query: 364 ccaaccactagaaataacctagctgaataattacatatgtgtcatatacaactttcctta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ccaaccactagaaataacctagctgaataattacatatgtgtcatatacaactttcctta 412

                                                                       
Query: 424 tggtcttatgaatttacagaaaatcactttaaacatattgacttgccccagccccactta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tggtcttatgaatttacagaaaatcactttaaacatattgacttgccccagccccactta 352

                                                                       
Query: 484 gcattagaagctcatgctgtacccagtctttatcacaaaagtggttttgtttgcttgttt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||
Sbjct: 351 gcattagaagctcatgctgtacccagtctttatcacaaaagtggttttgtttgc----tt 296

                                                                       
Query: 544 gtttgtttgtttgtttttaactgcagaaacccatagctggccaatgcatcatgaatgaga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gtttgtttgtttgtttttaactgcagaaacccatagctggccaatgcatcatgaatgaga 236

                                                                       
Query: 604 tagagtggagaactcagagatctatatcacaaggctcagggagcattttggaagaggggg 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tagagtggagaactcagagatctatatcacaaggctcagggagcattttggaagaggggg 176

                               
Query: 664 aagacagaatgcaagggctg 683
           ||||||||||||||||||||
Sbjct: 175 aagacagaatgcaagggctg 156


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)