Query= MSMg01no493_m14.b1 MSMg01no493_m14.b1 CHROMAT_FILE:
MSMg01no493_m14.b1 PHD_FILE: MSMg01no493_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:27 2005
(618 letters)
>mm_chr9_100497453_100498470
Length = 1018
Score = 1065 bits (551), Expect = 0.0
Identities = 595/617 (96%), Gaps = 19/617 (3%)
Strand = Plus / Plus
Query: 5 gaattcattttctt-ttcttttcttttagttttaaattaaccatgtttcccaaaattata 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattttcttctt-ttttcttttagttttaaattaaccatgtttcccaaaattata 263
Query: 64 atcgccagaacgttcctgcttttgatatctgttctttagctaccccaggttaaaatttaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcgccagaacgttcctgcttttgatatctgttctttagctaccccaggttaaaatttaa 323
Query: 124 ttaattttgttattgttgtttgctcttttgagacagagtatcatgtagcccaggctttcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttaattttgttattgttgtttgctcttttgagacagagtatcatgtagcccaggctttcc 383
Query: 184 tgaaacttactagacagtgaaggatgtccattacattacattacgttatggtactgtccc 243
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 384 tgaaacttactagacagtgaaggatgtccattacattacattatgttatggtactgtccc 443
Query: 244 ctgtcctccgagtgtgtgtgtgtgcgcgcgcgcgcgcgtgtgtgcgtgtgtgtgtgttgg 303
||||||||||||||||||||||| | |||||||||||| ||||||||| | ||
Sbjct: 444 ctgtcctccgagtgtgtgtgtgt------gtgcgcgcgtgtgt--gtgtgtgtg-g--gg 492
Query: 304 ggggg--gtgctgataggtgcccccacacccaggttacatagtgctggagcctgaacttg 361
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gggggtagtgctgataggtgcccccacacccaggttacatagtgctggagcctgaacttg 552
Query: 362 gggttcctcagatactaagaagcatccccagccttagaaaataaagttcgtaactgagcc 421
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 553 gggttcctcagatactaagaagcatccccagccttagaaaacaaagttcgtaactgagcc 612
Query: 422 aggctcagaaatctgcatcttgctagcccctccttccccactcacttccggttctaactc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aggctcagaaatctgcatcttgctagcccctccttccccactcacttccggttctaactc 672
Query: 482 cttcctcaactccaagctaaagcggcgctggagcagctccacgaaaccacccacgaaacc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cttcctcaactccaagctaaagcggcgctggagcagctccacgaaaccacccacgaaacc 732
Query: 542 acccacggtagtgtctctctgggcctttgatgatttttttttttacctctcggtgccctc 601
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 733 acccacggtagtgtctctctgggcctttgatgattttttt----acctctcggtgccctc 788
Query: 602 tgtcccccttctccagc 618
|||||||||||||||||
Sbjct: 789 tgtcccccttctccagc 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_m14.g1 MSMg01no493_m14.g1 CHROMAT_FILE:
MSMg01no493_m14.g1 PHD_FILE: MSMg01no493_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:27 2005
(334 letters)
>mm_chr9_100655858_100656591
Length = 734
Score = 632 bits (327), Expect = 0.0
Identities = 333/335 (99%), Gaps = 1/335 (0%)
Strand = Plus / Minus
Query: 1 atgttttgatacattcatatgcaacaatttaaaagacaggccatgaatttggtgggggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atgttttgatacattcatatgcaacaatttaaaagacaggccatgaatttggtgggggac 608
Query: 61 agtatgcatggg-aatttcagttagagggatgaaaggaaagggaaaagcaacataattac 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agtatgcatgggaaatttcagttagagggatgaaaggaaagggaaaagcaacataattac 548
Query: 120 attttaattacaattctattataatctatctctaagactgaaaatctccctgtaagattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 attttaattacaattctattataatctatctctaagactgaaaatctccctgtaagattt 488
Query: 180 tacaaaaggagagaaatggttccttctttgaatctactttattcatcttattcacaggtt 239
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tacaaaaggagagaaatgattccttctttgaatctactttattcatcttattcacaggtt 428
Query: 240 ataaattatacatatgttctttcatttaaacttttttacttcatgtttcaaaaacttata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ataaattatacatatgttctttcatttaaacttttttacttcatgtttcaaaaacttata 368
Query: 300 aaattttcaaagaatttccaatggcagcagcatga 334
|||||||||||||||||||||||||||||||||||
Sbjct: 367 aaattttcaaagaatttccaatggcagcagcatga 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
