Query= MSMg01no493_m18.b1 MSMg01no493_m18.b1 CHROMAT_FILE:
MSMg01no493_m18.b1 PHD_FILE: MSMg01no493_m18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:28 2005
(642 letters)
>mm_chr9_61467876_61468915
Length = 1040
Score = 1160 bits (600), Expect = 0.0
Identities = 629/640 (98%), Gaps = 6/640 (0%)
Strand = Plus / Plus
Query: 5 gaattctgggcct-t-agcttcccgaggaccccaggcatccttcagtcggtccaggctgg 62
|||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctggg--tatcagcttcccgagaaccccaggcatccttcagtcggtccaggctgg 262
Query: 63 cctcttgcttcctttctggtccactgaactccagggcttgggagcagcgtctagggacag 122
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 263 cctcttgcttcctttctggtccactgaactccagggcttgggaacagcgtctagggacag 322
Query: 123 ctcctctttgtctgtgcttcatggtctggcaatagatgtctgtcttccctgacctctctc 182
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 323 ctcctctttgtctgtgcttcatggtctggcaatagatgtctggcttccctgacctctctc 382
Query: 183 tggtaccccaagtcagagggatctgccaggctataccacacactcccagcagggatccta 242
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tggtaccccaagtcagaggaatctgccaggctataccacacactcccagcagggatccta 442
Query: 243 ggggacccctccctcctttccctgccgctacttgtgctaaaccctgaagccaaagtcaac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggggacccctccctcctttccctgccgctacttgtgctaaaccctgaagccaaagtcaac 502
Query: 303 cttctgccttcgccactgcagataccagagacaccgtggtcctgggccaagactagggta 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 503 cttctgccttcgccactgcagataccagagacaccgtggtcctgggccaagactag--ta 560
Query: 363 cagcactgaggtgttcttccctccccatatgagaaatttaagcagcacctctcatgagag 422
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagcagtgaggtgttcttccctccccatatgagaaatttaagcagcacctctcatgagag 620
Query: 423 tgcaccagccatgataagcatttcaaaggaacgtatttaaaaaaaaaataaaaagcaatg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcaccagccatgataagcatttcaaaggaacgtatttaaaaaaaaaataaaaagcaatg 680
Query: 483 tctagattctttgtaaaggctagtgaacctggcctttaaaaatactgatttgtcttgatc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctagattctttgtaaaggctagtgaacctggcctttaaaaatactgatttgtcttgatc 740
Query: 543 cttgagtgtttaaccatcctcacctgcctccccgacctcacccatatctagctttggtcc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttgagtgtttaaccatcctcacctgcctccccgacctcacccatatctagctttggtcc 800
Query: 603 tcagcattggccctgacattctcccccactgggagcagac 642
||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcagcattggccctgacattctcccccactgggagcagac 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1040
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1030
Effective search space: 650960
Effective search space used: 650960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_m18.g1 MSMg01no493_m18.g1 CHROMAT_FILE:
MSMg01no493_m18.g1 PHD_FILE: MSMg01no493_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:28 2005
(643 letters)
>mm_chr9_61531180_61532223
Length = 1044
Score = 822 bits (425), Expect = 0.0
Identities = 446/453 (98%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 192 aagggagtctagggatgtagctcagttggtagagtttatgcatgcatccttggtttgctc 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 aagggagtctagggatgtagctcagttggtagagtttatgcatgcatccttggtttgctc 985
Query: 252 cccagcaccttataaacccagcatagtggtgcacccttataaccctaaccctggggaagt 311
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 984 cccagcaccttataaacccagcatactggtgcacccttataaccctaaccctggggaagt 925
Query: 312 ggagggttaaatgttcaaggtcttctgcaactaccaaatggacaatttgaagccagcctg 371
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 924 ggagggttaaacgttcaaggtcttctgcaactaccaaatggacagtttgaagccagcctg 865
Query: 372 gactgcatcagaccctgtcgtagagagagggaggagggggaagcagatgtataagtcacc 431
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gactgcatcagaccctgtcctagagagagggaggagggggaagcagatgtataagtcacc 805
Query: 432 aacagctttcccacccaagcctaactcttctcagcccactagtagaatctcacctggaac 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aacagctttcccacccaagcctaactcttctcagcccactagtagaatctcacctggaac 745
Query: 492 ggagataggcgcatcttccatctttccaaggacttggggacagtcaagggaattagaaac 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggagataggcgcatcttccatctttccaaggacttggggacagtcaagggaattagaaac 685
Query: 552 aaggtccccaggttgggggg-ggtccgtcaacccaccctggcacaggtgaacagagaagc 610
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 684 aaggtccccaggttggggggcggtccatcaacccaccctggcacaggtgaacagagaagc 625
Query: 611 tggggatggtgtcatacactgagcccaggggat 643
|||| ||||||||||||||||||||||||||||
Sbjct: 624 tgggaatggtgtcatacactgagcccaggggat 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1044
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1034
Effective search space: 654522
Effective search space used: 654522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
