CTTCCTCTCCTTCCCCCTTTCCCCCCCCCCTTCATCCCCCCTTCTCTCCT
CCTTCGTCCCCCTCTCCCTCACCATTTCCCTATACACCTACCTTTCCTTN
CTCCCTTTTTCCCCATCTTTCTCGCCCCGTCTCCCTTTACCCTCCTTTTC
GCTCCTCTTTCCGTCGTTGTGTTCCCCTCCTTCGCCCCTCTTTAATAAAA
ATCTTTGGCCGCGGGCCCCGCTCTCTTTAATTACCCGNAAACTCGCCCCC
CCTAAAATTATTTTGGCTAATCTGCACAAGAAAAAAAACCCGCGGCCGGG
GGGGAAAAAACATTCCCCCCCTTCGGTGGGGAACCCCTTTTTTTTTTCCT
CCCTCCCCNAAAACCCACCGAGGCGCCCCACGGGGGGGNNTCTCACAAAA
AAAACCCCTCCTTGGGCACCCACCCCCTTTATTTTGGTTATAAAAAAAAA
CCACAACTCGCTTCCACTTGGGGCCCAATATTTTTTTTCTTTTTCTTTTC
CTCTCCCCACACTTCTCTTGTTGTAAAAAAATAAAAAGCGGGGTAAGAGG
TGGTTAACACATTTTGTGTGGATTTTTTTCCACCCCCCNAAAAAAAAAAA
AAAGAGGGGGTTTTCTCTCTCCCTTTCCGCCAACCACCCTCTCNTTTATC
TCCGTGTTTGCGTCCTGTTTCCCGTTTTCCCTAAAACACAACCCCTCCCT
CCCCTCTCCGATAAATAACCACAATAATTTTTTCCTTTTCGGGTTACTAA
AACACACAAAAAAACAACCTCTTCTTCCCTCTTTTTGTTTTGGCGCGCGG
GAGACACACCTCCACCCTTCCCGCGCCGCTTTTTCTCTCCCCCCCCTCCT
CCCTCTTTTTCTTTTCTTACGTGTTCACTTCACCCATAGTACCCTCGN

TACGACGCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGTGACTTGGGTTGTC
TCCTTCCTATGTGCAGTTAAGAGCACTTCTGAACTTCAGGAAAAGTGAAT
ATCATTAAAGTGCTCCACTCACCTCATCCTTTGTAGTTACTTGAGCATTT
CTGGTTAGTCATTTTCCCCCCACTGGAAGTTATTCTTTCCCATGTGTGCA
AACCAGGATTTATCCTGTCTACTTCCCTCTGGTCTAGAATTTCAGAGTCC
TGGTTTCCTAAAAGAAAGTATAGTTGTCATATAGCCAACCACCACTGCCT
AGCAGGGAGAGATGGCTATAATTGCCTTCCACCGTCTTCTTCGATTGCTG
AGTGTTGGAACTCCACATGGGGACTGTGAAATGCATAGCATACTCCTTTG
AGTTAAGATATCTCCTCTCCATCTAATGTACCCATTGCAGAGACACCTGA
GGTCAATTATCTTGCGTATAACATAAGAAGCTTCTGAAAGGGTGTGTGAC
AGCCCAACTTCTGCCTGGATGGGAGTGAACTCAATAGAAATGGGCATATT
GGCTACTTCCACATGTTATCTAAGAAACAGAACAGTCAGACAAGAGTGTA
CTGGTACTTGTTAATTAAAGAAAATCTTCAGAAATCCTTAATACAACTAT
AAATTGTGAAGACAGTGAATTCTTGAGAAT

Query= MSMg01no495_b01.g1 MSMg01no495_b01.g1 CHROMAT_FILE:
MSMg01no495_b01.g1 PHD_FILE: MSMg01no495_b01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:03 2005
         (648 letters)



>mm_chr9_28962465_28963512
          Length = 1048

 Score = 1122 bits (580), Expect = 0.0
 Identities = 631/648 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagtgacttgggttgtctccttcctatgtgcagttaagagcacttctgaacttcaggaa 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aaagtgacttgggttgtctccttcctatgtgcagttcagagcacttctgaacttcaggaa 260

                                                                       
Query: 61  aagtgaatatcattaaagtgctccactcacctcatcctttgtagttacttgagcatttct 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgaatatcattaaagtgttccactcacctcatcctttgtagttacttgagcatttct 320

                                                                       
Query: 121 ggttagtcattttccccccactggaagttattctttcccatgtgtgcaaaccaggattta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttagtcattttccccccactggaagttattctttcccatgtgtgcaaaccaggattta 380

                                                                       
Query: 181 tcctgtctacttccctctggtctagaatttcagagtcctggtttcctaaaagaaagtata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgtctacttccctctggtctagaatttcagagtcctggtttcctaaaagaaagtata 440

                                                                       
Query: 241 gttgtcatatagccaaccaccactgcctagcagggagagatggctataattgccttccac 300
           ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gttgtcagatagccaaccaccactgcctagcagggagagacggctataattgccttccac 500

                                                                       
Query: 301 cgtcttcttcgattgctgagtgttggaactccacatggggactgtgaaatgcatagcata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtcttcttcgattgctgagtgttggaactccacatggggactgtgaaatgcatagcata 560

                                                                       
Query: 361 ctcctttgagttaagatatctcctctccatctaatgtacccattgcagagacacctgagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcctttgagttaagatatctcctctccatctaatgtacccattgcagagacacctgagg 620

                                                                       
Query: 421 tcaattatcttgcgtataacataagaagcttctgaaagggtgtgtgacagcccaacttct 480
           |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 621 tcaattatcttgcgtataacataagaagattctgaaagggtgtatgacagcccaacttct 680

                                                                       
Query: 481 gcctggatgggagtgaactcaatagaaatgggcatattggctacttccacatgttatcta 540
           |||||||||||||||||||| || ||||||| || ||  || ||||||||||||| ||||
Sbjct: 681 gcctggatgggagtgaactcgattgaaatggacagatcagccacttccacatgttttcta 740

                                                                       
Query: 541 agaaacagaacagtcagacaagagtgtactggtacttgttaattaaagaaaatcttcaga 600
           |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaaacagaatagtcagaccggagtgtactggtacttgttaattaaagaaaatcttcaga 800

                                                           
Query: 601 aatccttaatacaactataaattgtgaagacagtgaattcttgagaat 648
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aatccttaatacaactataaattgtgaagacagtgaattcttgagaat 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)