Query= MSMg01no495_f07.b1 MSMg01no495_f07.b1 CHROMAT_FILE:
MSMg01no495_f07.b1 PHD_FILE: MSMg01no495_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:23 2005
(562 letters)
>mm_chr9_51950433_51951394
Length = 962
Score = 1044 bits (540), Expect = 0.0
Identities = 552/556 (99%)
Strand = Plus / Minus
Query: 7 gaattcatgaactttccttctgtaacactgaaaaactgcctcagtatcacactcagggtc 66
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 gaattcatgaactatcattctgtaacactgaaaaactgcctcagtatcacactcagggtc 872
Query: 67 tggttactgatttcctattatactaataattttctgtgactgtgcctttcagcaatcact 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 tggttactgatttcctattatactaataattttctgtgactgtgcctttcagcaatcact 812
Query: 127 atccaaaatatcagtattataatagttataattatataaaattataattctctgttcaag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atccaaaatatcagtattataatagttataattatataaaattataattctctgttcaag 752
Query: 187 aactaattcaaacataatcctttagggtctgaggaaagggaaaggaaaatatcttattca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aactaattcaaacataatcctttagggtctgaggaaagggaaaggaaaatatcttattca 692
Query: 247 agtgaatttgatgccctaaagtttaaagttagtctggattcagtcagtctagttaactgc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 agtgaatttgatgccctaaagtttaaagttagtctggattcagtcagtctagttaactgc 632
Query: 307 ccacagtgtcatttgagaatgatcagacacaaaaagacatgagatcttcaagagcttcgt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ccacagtgtcatttgagaatgatcagacacaaaaagacatgagatcttcaagagcttcgt 572
Query: 367 gcttcgtctactgggtatcaaagggtttcttagagacacttagccaagagaagttgttga 426
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 571 gcttcgtctactgggtatcaaagcgtttcttagagacacttagccaagagaagttgttga 512
Query: 427 aatgtttgtttcctagcagtgttttcagtggcagtacaatgaaaactacatgttacctta 486
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aatgtttgtttcctagcagtgatttcagtggcagtacaatgaaaactacatgttacctta 452
Query: 487 tataactcagtagttaacattctaacatatggcccagtttgaaagttactaataagacat 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tataactcagtagttaacattctaacatatggcccagtttgaaagttactaataagacat 392
Query: 547 ttgacattattcttgt 562
||||||||||||||||
Sbjct: 391 ttgacattattcttgt 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_f07.g1 MSMg01no495_f07.g1 CHROMAT_FILE:
MSMg01no495_f07.g1 PHD_FILE: MSMg01no495_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:23 2005
(663 letters)
>mm_chr9_51816458_51817520
Length = 1063
Score = 1197 bits (619), Expect = 0.0
Identities = 652/663 (98%), Gaps = 1/663 (0%)
Strand = Plus / Plus
Query: 1 atgtctggacttggctaggctaaggagaacacgtctgctgataaagcacttgctcctgag 60
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 202 atgtctggacttggctaggctaaggagaacgcatctgctgataaagcacttgctcctgag 261
Query: 61 gatgtattttggtgtgtttctggatgagatcaggttttgagtcagagatgagaagagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gatgtattttggtgtgtttctggatgagatcaggttttgagtcagagatgagaagagaag 321
Query: 121 atcatgttcagccatgtgggcaaaaattatcccaccccctgggggccagcatagcatacc 180
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 322 atcatgttcagccatgtgggcaggaattatcccaccccctgggggccagcatagcatacc 381
Query: 181 aagagtttagaaagagcttggatgtgctttctgggcttgagctaagatcttcatcttgtt 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 382 aagagtttagaaagagcttggatgtgctttctgggcttgagttaagatcttcatcttgtt 441
Query: 241 agcctacgacacagctctgtgccttcagactctgactgagattgcttgactgcctctctg 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agcctaggacacagctctgtgccttcagactctgactgagattgcttgactgcctctctg 501
Query: 301 ggttctccaactaagcaggtggtgtatcatgaggcttctcagcttcagaaaaccacaaga 360
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 502 ggttctccaactaagcaggtggtatatcatgaagcttctcagcttcagaaaaccacaaga 561
Query: 361 gcaaatccctgtaataaattttacatttttgtatatagttatcctttggtgaaggattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcaaatccctgtaataaattttacatttttgtatatagttatcctttggtgaaggattaa 621
Query: 421 tgaaggattagctccaggacccttcgtgaatccaaagtcccttatataaaatgacacagt 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 622 tgaaggattagctccaggacccttcgtgaatc-aaagtcccttatataaaatgacacagt 680
Query: 481 aattacatataacttacatacatcctctttaaataagtattatcattttatttctttgaa 540
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acttgcatataacttacatacatcctctttaaataagtattatcattttatttctttgaa 740
Query: 541 tatgttgtgtgtcctagcacaaatgtaaaagtcagagggtaacttggggtagccggtagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatgttgtgtgtcctagcacaaatgtaaaagtcagagggtaacttggggtagccggtagc 800
Query: 601 tctctttctagcatttaggtcctgggattgaaatcagatcatgaggtttggcgccttact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctctttctagcatttaggtcctgggattgaaatcagatcatgaggtttggcgccttact 860
Query: 661 cac 663
|||
Sbjct: 861 cac 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
