Query= MSMg01no496_c20.b1 MSMg01no496_c20.b1 CHROMAT_FILE:
MSMg01no496_c20.b1 PHD_FILE: MSMg01no496_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:25 2005
(649 letters)
>mm_chr9_122928692_122929740
Length = 1049
Score = 1195 bits (618), Expect = 0.0
Identities = 638/646 (98%), Gaps = 4/646 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtcaatgccagtgtgtatggatatatgttagggatacatttccttaaaggaga 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gaattcagtcaatggcagtgtgtatggatatatgttagggatacatttccttaaaggaga 767
Query: 65 gctgtagaagtgtataacgtgagctaagtgtggtggttggtacacatgaggaagcagagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gctgtagaagtgtataacgtgagctaagtgtggtggttggtacacatgaggaagcagagg 707
Query: 125 caagtggatctctgtgagtccgagaacagcctgctctaaatagctctacatagccagggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 caagtggatctctgtgagtccgagaacagcctgctctaaatagctctacatagccagggc 647
Query: 185 tacacagcaaaacttgttttgttgatatataaaatacaaataatatttaatgtatgggac 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 646 tacacagcaaaacttgttttgttgatatataaaatacaaataatatttaatgtatggggc 587
Query: 245 ttggaagaaacactttattccctgttaaagagctttttcatggacattcttacatgctac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttggaagaaacactttattccctgttaaagagctttttcatggacattcttacatgctac 527
Query: 305 cttgcttctcatgcgggtggttttgtggctgaaataaaaggatggattactggggtttgg 364
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 526 cttgcttctcatgcgggtggttttgtggatgaaataaaaggatggattactggggtttgg 467
Query: 365 agagattgcttagcagttaggcagcttgcaaccttcccacaagtgcctcccaacctcata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agagattgcttagcagttaggcagcttgcaaccttcccacaagtgcctcccaacctcata 407
Query: 425 cctccaggggttccactattcttttctggcctccaaaggcacctatcctcatgtacatat 484
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cctccaggggttccacta---ttttctggcctccaaaggcacctatcctcatgtacatat 350
Query: 485 atatacacctgaacacagatacacattaatacataaaattaaattttaaataaaaagcat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 349 atatacacctgaacacagatacacattaatacataaaattaaattttaaataaaaagaat 290
Query: 545 agattatcccaattagtcctatgtggtataaaccactccaatttgcagataa-gaagttg 603
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 289 agattatcccaattagtcctatgtggtataaaccactccaatttgcagataaggaagttg 230
Query: 604 agactcaagggtactcactgtactattccacttaataatggagata 649
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 agactcaagggtactcactgtactattccacttaataatggagata 184
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_c20.g1 MSMg01no496_c20.g1 CHROMAT_FILE:
MSMg01no496_c20.g1 PHD_FILE: MSMg01no496_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:25 2005
(605 letters)
>mm_chr9_122772809_122773813
Length = 1005
Score = 1162 bits (601), Expect = 0.0
Identities = 604/605 (99%)
Strand = Plus / Plus
Query: 1 aaggccagcctgggctgactacataataagtaaggccctgtctcaaaacaaagcagtggg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccagcctgggctgactacataacaagtaaggccctgtctcaaaacaaagcagtggg 260
Query: 61 gtcagaagttcacactgatataaactgattatattttaagaagcttcgttaatagccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcagaagttcacactgatataaactgattatattttaagaagcttcgttaatagccaag 320
Query: 121 tcagctagtaacatgactttaatcccatcacttaggagacagaggagggcagacttttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagctagtaacatgactttaatcccatcacttaggagacagaggagggcagacttttgt 380
Query: 181 tacttggaggtaaagcaagttccagccagggctatgtgagactctatctcaaaaacaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacttggaggtaaagcaagttccagccagggctatgtgagactctatctcaaaaacaaac 440
Query: 241 aacaaagtaaggagagaggaaatcttcctcacaaggcctcccaataaaaaaatgtagaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaaagtaaggagagaggaaatcttcctcacaaggcctcccaataaaaaaatgtagaac 500
Query: 301 accaagctcactgctacagacaagatgctaatcaggaagggaatgttgagaagaaacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accaagctcactgctacagacaagatgctaatcaggaagggaatgttgagaagaaacaga 560
Query: 361 atacttgaatgcagaattcaaaattctttccccctcaaacagtacaaattacaaaattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atacttgaatgcagaattcaaaattctttccccctcaaacagtacaaattacaaaattaa 620
Query: 421 acacatattttaaagtggtgaaatgtcacaagtgccagtaacaagaacacatcaacctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acacatattttaaagtggtgaaatgtcacaagtgccagtaacaagaacacatcaacctta 680
Query: 481 tctaagcacaggaaaacatcagatataagaacattctaatatttcaagtaacaaaatact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctaagcacaggaaaacatcagatataagaacattctaatatttcaagtaacaaaatact 740
Query: 541 tcaaaaaagattttagggactggagaggtgggctgttgatttaagagcactgaccactgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcaaaaaagattttagggactggagaggtgggctgttgatttaagagcactgaccactgc 800
Query: 601 ttccc 605
|||||
Sbjct: 801 ttccc 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
