NNNNNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTT
ATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATA
TTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTT
GGTGGTCTCTTTGTCTTATTGATGGTGTCTTGTGCCTTGCAGAAACTTTG
GAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCA
TTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTT
TTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAG
TTCTTTGATCCATTTAGATTTGACCTTACTACAAGGAGATAAGTATGGAT
CGATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTG
TTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAA
GATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTAT
TCCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTACA
CAATTGCTCTGTAGTAAAGCTTTANGTCAGGCATGGTGATTCCACAGAAG
GTCTTTTATCTTGAGAAGATTTTTGCTATCTAGGNTTTTTGTTATTCAGA
TGATTTTGCAATTG

NAAATTTACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTAGACCAGGCTG
GCTTCAAACTCTGAAAGATCTTCTTGAGTTCTGGAATTAAAGGAGTGTGC
CACCACTACCTACCTTGGAAATTACTCATGACTTCTTTATTTTCTTTAAA
AAGGTGATCTTAGCCAGCTGGTACCGGATTTATACCAAAATAATGGATTT
GATTGGTATTCAAACCAAGATCTGCTGGACAGTTACCCGAGGAGAAGGAC
TCAGTCCGATTGAGAGCTGTGAGGGTGAGCCCCTTTCCGTGTTGTCCTGT
TGTCTGTGGGACTACAGAAGACTTACTGCAATCTTAGTGATACGAGTAGC
AAACATTTTATTATGCTCTTGGATTTTGCAAGTCTCAATTTTGGGCGGGC
TGGTTTGCTTCCATGGTCACAGGGCAATCGCATGGCTGTGCAAAGTGGAC
TGAACAGGAAGCTGCTTTGGTCACATTTTGACCCTTGGGCTGGATTGGTT
CAGGTGTTACCTGAGATGTCTAGATGCCACCTTTCCATAGACTTTGTTTT
TTTTTTTTTAATATACTTTTTATTAGGTATTTTCCTCATTTACATTTCCA
GTGCTATCCCNAAAGTCCCCCATAACCTTCCACCCNNACTCCCTAAACAC
CACTCCCACTTTTTGGTCCTGGCGNTCCCCTGTACTGGGGCATATAAAGT
TTGCCTGACCTCTCT

Query= MSMg01no496_m22.g1 MSMg01no496_m22.g1 CHROMAT_FILE:
MSMg01no496_m22.g1 PHD_FILE: MSMg01no496_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:16 2005
         (568 letters)



>mm_chr9_24279223_24280191
          Length = 969

 Score = 1056 bits (546), Expect = 0.0
 Identities = 562/568 (98%), Gaps = 2/568 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actctagaccaggctggcttcaaactctgaaagatcttcttgagttctggaattaaagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 actctagaccaggctggcttcaaactctgaaagatcttcttgagttctggaattaaagga 735

                                                                       
Query: 61  gtgtgccaccactacctaccttggaaattactcatgacttctttattttctttaaaaagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gtgtgccaccactacctaccttggaaattactcatgacttctttattttctttaaaaagg 675

                                                                       
Query: 121 tgatcttagccagctggtaccggatttataccaaaataatggatttgattggtattcaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tgatcttagccagctggtaccggatttataccaaaataatggatttgattggtattcaaa 615

                                                                       
Query: 181 ccaagatctgctggacagttacccgaggagaaggactcagtccgattgagagctgtgagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ccaagatctgctggacagttacccgaggagaaggactcagtccgattgagagctgtgagg 555

                                                                       
Query: 241 gtgagcccctttccgtgttgtcctgttgtctgtgggactacagaagacttactgcaatct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtgagcccctttccgtgttgtcctgttgtctgtgggactacagaagacttactgcaatct 495

                                                                       
Query: 301 tagtgatacgagtagcaaacattttattatgctcttggattttgcaagtctcaattttgg 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 494 tagtgatacgagtagcaaacattttattatgcttttggattttgcaagtctcaattttgg 435

                                                                       
Query: 361 gcgggctggtttgcttccatggtcacagggcaatcgcatggctgtgcaaagtggactgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gcgggctggtttgcttccatggtcacagggcaatcgcatggctgtgcaaagtggactgaa 375

                                                                       
Query: 421 caggaagctgctttggtcacattttgacccttgggctggattggttcaggtgttacctga 480
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 caggaagctgctttgatcacattttgacccttgggctggattggttcaggtgttacctga 315

                                                                       
Query: 481 gatgtctagatgccacctttccatagactttgtttttttttttttaatatactttttatt 540
           |||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||
Sbjct: 314 gatgtctagatgccacctttccatagactttggtttttttttt--aatatactttttatt 257

                                       
Query: 541 aggtattttcctcatttacatttccagt 568
           | ||||||||||||||||||||||||||
Sbjct: 256 atgtattttcctcatttacatttccagt 229


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 969
Length adjustment: 10
Effective length of query: 558
Effective length of database: 959
Effective search space:   535122
Effective search space used:   535122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)