Query= MSMg01no497_d04.b1 MSMg01no497_d04.b1 CHROMAT_FILE:
MSMg01no497_d04.b1 PHD_FILE: MSMg01no497_d04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:48 2005
(633 letters)
>mm_chr9_67672638_67673670
Length = 1033
Score = 1139 bits (589), Expect = 0.0
Identities = 619/629 (98%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 6 gaattcaggagtttacg-tcattcttggctgtatagtaagtttgaagccagcctgggcta 64
||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggagttcaaggtcattcttggctgtatagtaagtttgaagccagcctgggcta 264
Query: 65 catgagatcatgagactctgtttcagataagaagtgggcttaaatttaattataatgtat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catgagatcatgagactctgtttcagataagaagtgggcttaaatttaattataatgtat 324
Query: 125 accacatatgcacagagactaggctaactcctagagaaattataagaagaaatatagttt 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 accacatatgcacagagactaggctaactcctagggaaattataagaagaaatatagttt 384
Query: 185 ctgtgctaagagagaagagaaaaatagtcatatgaagttctcaactaaaaccggaggctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 ctgtgctaagagagaagagaaaaatagtcatatgaagttctcaactaaaaccgaaggctc 444
Query: 245 gaggaaaagagcgagaagaggggagagaaaggttaaaaacaaggaacagaaaacagttca 304
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 gaggaaaagagcgagaagaggggagagaaagggcaaaaacaaggaacagaaaacagttca 504
Query: 305 agcaggtgcatgcatgaagaatttccccacaatggtcatctttagcagtataaaggaata 364
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agcaagtgcgtgcatgaagaatttccccacaatggtcatctttagcagtataaaggaata 564
Query: 365 gaccattgacgtgggaaatggcatggatacatctcatatagtaaactatgaaagtggagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 565 gaccattgacgtgggaaatggcatggatacatctcatatagtaaactatgaaaatggagc 624
Query: 425 cacactcaccaaaaagaacactgctttttaattcacataaaatcccacacatgccaaatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cacactcaccaaaaagaacactgctttttaattcacataaaatcccacacatgccaaatc 684
Query: 485 atttacagcaatagggaacagatgagcagtttggcttcttggggtgggagataggccgga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttacagcaatagggaacagatgagcagtttggcttcttggggtgggagataggccgga 744
Query: 545 agcagaggaggaaggcaaggatcattatggagcatcaggaagttgttaggagcgctgggt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agcagaggaggaaggcaaggatcattatggagcatcaggaagttgttaggagcgctgggt 804
Query: 605 acatcatcatgcagaggagccaggttcag 633
|||||||||||||||||||||||||||||
Sbjct: 805 acatcatcatgcagaggagccaggttcag 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_d04.g1 MSMg01no497_d04.g1 CHROMAT_FILE:
MSMg01no497_d04.g1 PHD_FILE: MSMg01no497_d04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:48 2005
(573 letters)
>mm_chr9_67836713_67837685
Length = 973
Score = 1004 bits (519), Expect = 0.0
Identities = 549/559 (98%)
Strand = Plus / Minus
Query: 1 tttgggacggatagctataggacccttgatccttgccgagcaagagccagtggtgacttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 559 tttgggacggatagctataggacccttgatccttgccgagcaagagccagcggtgacttc 500
Query: 61 cttcttgtgacatttcaatacccacacacaggtctagcctgtctctgatgagcatccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttcttgtgacatttcaatacccacacacaggtctagcctgtctctgatgagcatccaca 440
Query: 121 cacctgaccctaagcccagtgtagtatcagatagcaaagccttgtaccaaagacaactga 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cacctgaccctaagcccagtgcagtatcagatagcaaagccttgtaccaaagacaactga 380
Query: 181 ctgttttgtgcattttttaagctctctcttctcctgagcactacagttacacattctcct 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctgttttgtgcattttttaagttctctcttctcctgagcactacagttacacattctcct 320
Query: 241 accataagaagtctctattctctctcctgctccaactatcagagtttaaatcttgtcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 accataagaagtctctattctctctcctgctccaactatcagagtttaaatcttgtcatc 260
Query: 301 tcctaggtgacacactctggtatggagtctccaagacctccactcagatttttcaaaggt 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 259 tcctaggtgacacactctggtatggagtctccaagacctccactcggatttttcaaaggt 200
Query: 361 ttattttgaagtgtgtgtgtgagtatgggtgtgtgcacttaagtgcagatccccatggat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 199 ttattttgaagtgtgtgtgtgagtatgggtgtgtgcacttaagtgcagatccccgtagat 140
Query: 421 gtcagaggcatcagccaaaggtgggtgctgacaactgaacctgggctcccacgagagcag 480
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 139 gtcagaggcatcagccaaaggtgggtgctgagaactgaacctgggcccccacgagagcag 80
Query: 481 caagtgctcttgtctggcaagccatctccatagcccgtattcacattccaactaatggac 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 79 caagtgctcttgtctggcaagccatctccatagcccgtattcacatcccaactaatggac 20
Query: 541 caatacggtgattgaataa 559
|||||| ||||||||||||
Sbjct: 19 caatacagtgattgaataa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
