Query= MSMg01no497_e24.b1 MSMg01no497_e24.b1 CHROMAT_FILE:
MSMg01no497_e24.b1 PHD_FILE: MSMg01no497_e24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:57 2005
(574 letters)
>mm_chr9_15914944_15915916
Length = 973
Score = 704 bits (364), Expect = 0.0
Identities = 388/396 (97%), Gaps = 1/396 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaggttgtgctttttagtctcttctgttttgggaacaaaggtgttttcatggtt 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ggaattcaggttgtg-tttttagtctcttctgttttgggaacaaaggtgttttcatggtt 337
Query: 64 gagtagcaagaccactaaggtatgagaaattgtggaggagttcttacaggatgttgctag 123
|||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||
Sbjct: 336 gagtagcaagaccactaaggtatgagaaattgtgaaagagtccttacaggatgttgctag 277
Query: 124 atgaatttctttcaatcgatcaacatgactcaacagaaatcaacggctgcccgttacaga 183
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 276 atgaatttctttcaatcgatcaacatgactcaacagaaatcaatggctacccgttacaga 217
Query: 184 ctatgagatgctggttgctgtggtcaactactccacgtgaagcagcttacaggtgctttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ctatgagatgctggttgctgtggtcaactactccacgtgaagcagcttacaggtgctttg 157
Query: 244 gctcacagtttaaagggacaccagctcacacagaaaggaagtcataaggcagctgcttac 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gctcacagtttaaagggacacaagctcacacagaaaggaagtcataaggcagctgcttac 97
Query: 304 aatgcattcagtcaggaagacagtgagataaatgccagtgctaagctcactttctctttt 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 96 aatgcattcagtcaggaagacagtgtgataaatgccagtgctaagctcactttctctttt 37
Query: 364 ccattcagtcttagactccagcacccaggatagtgc 399
||||||||||||||||||||||||||||||||||||
Sbjct: 36 ccattcagtcttagactccagcacccaggatagtgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 973
Length adjustment: 10
Effective length of query: 564
Effective length of database: 963
Effective search space: 543132
Effective search space used: 543132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_e24.g1 MSMg01no497_e24.g1 CHROMAT_FILE:
MSMg01no497_e24.g1 PHD_FILE: MSMg01no497_e24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:57 2005
(555 letters)
>mm_chr9_15739961_15740915
Length = 955
Score = 1035 bits (535), Expect = 0.0
Identities = 550/555 (99%)
Strand = Plus / Plus
Query: 1 tatgtccctggttccatagtaagtcccagaagacctctgacatttctgttaggtggggct 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgtccctggttccacagtaagtcccagaagacctctgacatttctgttaggtggggct 260
Query: 61 tgaaccaccttgaaccatgcttccagaactagattctttacctcaggtttggagaggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaccaccttgaaccatgcttccagaactagattctttacctcaggtttggagaggctt 320
Query: 121 gggaggagggctgttcttgtagggcttcctcactctggccaaatggtgggcttgaggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaggagggctgttcttgtagggcttcctcactctggccaaatggtgggcttgaggcaa 380
Query: 181 gaggtggctgctcaagatgggggtgagggaggatgcgctgattattttagaaaagcatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggtggctgctcaagatgggggtgagggaggatgcgctgattattttagaaaagcatac 440
Query: 241 tctggtaggagcaaagaagagactggagccaaaaggagactacattaccctggagggaag 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actggtaggtgcaaagaagagactggagccaaaaggagactacattaccctggagggaag 500
Query: 301 agaacctactgaggagcccagaatcaagaagactgccccatcatagaagaaagtcaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaacctactgaggagcccagaatcaagaagactgccccatcatagaagaaagtcaagta 560
Query: 361 tgtggaaccaagaaggatggtttgcacatacagaggcaaggctgaccattggggagggta 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 tgtggaaccaagaaggatggtttgcacatacacaggcaaggctgaccattggggagggta 620
Query: 421 aggtataagaaaaagcagaggagggtatgtaattcagctggtagaacgcagaaggcctgg 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 aggtataagaaaaagcagaggagggtatgtagttcagctggtagaacgcagaaggcctgg 680
Query: 481 ttttggattccctaacacacagagtgtggtgatgcctgtttggaatcccagtgcccagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttggattccctaacacacagagtgtggtgatgcctgtttggaatcccagtgcccagaa 740
Query: 541 agcaggggcaggaag 555
|||||||||||||||
Sbjct: 741 agcaggggcaggaag 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
