NNNTTTCTATAATTGCGGCGCTAAACGACTCCTATTTCCCAAAATCCGCG
GAATTCTGATGTTTCCCAAGACAGACATCCAAGGGTTCTCCTGCTGTGTT
AGTTACCGGTAGGTGGGTTCAGAAGTCAATATCATTTGTAATTTTGTAAC
TTCTGTGAAATAATGAACAGGTCTGGGCTGTTTAAAAATGCAAGGTGGAC
CCAAAAAAAAATGTTTAAAAAAAAAAAAGTTTAAAAAAAATGCAAGGTGG
AAATAGACTCAAAATAATCTGGAGGAAAGGCCTTGCTAAAAGCGTCAGCC
AAGTCTCCCGATTTCAGTCTTTTAGCAGTTTAACCACATCTCTGACCACC
TATCTATTGGCACTGCACATCATTGCTCCTTTAAGAACGCAGCCCTTCCT
TCTCTGCTGTTCACAGATTTAGGCTTCTGTCCTCCAGGACGACTTCAGAA
AGGGAATCCACAAGGCTCTGTGCTGTTCTAAAGCTTTATCTGCCTCTTTC
CTGAGCTTGGCTAGACCAATCCCTGAAGTGTATTTCTGAGGAGACAGTTC
CTCCAATCCTCAGTGCTCTCAGTTCCATTGTTGAGGGGATGAGAACAGGA
GCTCTTTTCATCCTGCCACGGGCTTCTACAGTAAAGTGAGAGATTAAGGT
GAGCTGTATCCGCTGTGGGCTCGTGGAAAGCAGAGTGTAAAGTCCTGTCC
AGTTAGGAGGGAAGCCTGTGTTCCACACAGAGTACGACGGCCC

GGGCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGACTTAAGAGAATAATA
AACACATCAAAGAAGCTACAGGAATTAAAAAAAAAAACTACAAAGTAGAT
AATACAAATGAAGATTAGGAAAAGGCTACAAAACCTACAAAACAAATCAA
ATGAGATTAGTACACACTTTTCCATGCTAACTGTGAATATTAATAGCTTC
AATTTCTCAATCAGAACACACAGAATAACAAATTGGGTCCAACACTAGAG
CCATCTATTTATTGCCTCCAAGAAACACACCTCACTATCAAAAATAAAGA
CTGTCTTAGGATTAAGAGTTGAAAAAAAGTATTCCAAGCAAAGGAAACTG
GGAAACAAGCAGATATACCTATTCTAATGTTTGACAGAATAGACCTCAAA
CACTAGCTAGTCAGAAGAAATAAAGATTAGTAGATACTGGTTAAGGGAAC
AATTTATCAAGAAGAAACTACAATCTAAACATTATATGCACTGAACACAG
GTGTACCCAGTTTTATATATTACTAAATATGAGTTTTAGAAGAGATCGCT
CAGCACTTAAAATATTCTCTTGCAGTGGATCTAGGTTTGGTTCCCAGCAC
CCATGTGGTGGGTCACAACCATCCTTAATGACAATTACAGGGGACCTGAC
GTCCTTCTAGCCTCTCAAGGCACCAAACACACAATGGTGCACATGTATGC
AT

Query= MSMg01no497_k10.b1 MSMg01no497_k10.b1 CHROMAT_FILE:
MSMg01no497_k10.b1 PHD_FILE: MSMg01no497_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:25 2005
         (633 letters)



>mm_chr9_100864233_100865268
          Length = 1036

 Score = 1143 bits (591), Expect = 0.0
 Identities = 626/641 (97%), Gaps = 9/641 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagacatccaagggttctcctgctgtgttagttaccggtaggtgggttcagaagtcaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cagacatccaagggttctcctgctgtgttagttaccggtaggtgggttcagaagtcaata 256

                                                                       
Query: 61  tcatttgtaattttgtaacttctgtgaaataatgaacaggtctgggctgtttaaaaatgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tcatttgtaattttgtaacttctgtgaaataatgaacaggtctgggctgtttaaaaatgc 316

                                                                       
Query: 121 aaggtggacccaaaaaaaaat----gtttaaaaaaaaaaaagtttaaaaaaaa-tgcaag 175
           ||||||||||||||||||||     ||||||||||||||| | |||||||||| ||||||
Sbjct: 317 aaggtggacccaaaaaaaaaaaaaagtttaaaaaaaaaaa-gcttaaaaaaaaatgcaag 375

                                                                       
Query: 176 gtggaaatagactcaaaataatctggaggaaaggccttgctaaaagcgtcagccaagtct 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtggaaatagactcaaaataatctggaggaaaggccttgctaaaagcgtcagccaagtct 435

                                                                       
Query: 236 cccgatttcagtcttttagcagtttaaccacatctctgaccacctatctattggcactgc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cccgatttcagtcttttagcagtttaaccacatctctgaccacctatctattggcactgc 495

                                                                       
Query: 296 acatcattgctcctttaagaacgcagcccttccttctctgctgttcacagatttaggctt 355
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 496 acatcattgctcctttaagaacgcagcccttccttctctgctcttcacagatttaggctt 555

                                                                       
Query: 356 ct---gtcctccaggacgacttcagaaagggaatccacaaggctctgtgctgttctaaag 412
           ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cttctgtcctccaggacgacttcagaaagggaatccacaaggctctgtgctgttctaaag 615

                                                                       
Query: 413 ctttatctgcctctttcctgagcttggctagaccaatccctgaagtgtatttctgaggag 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ctttatctgcctctttcctgagcttggctagaccaatccctgaagtgtatttctgaggag 675

                                                                       
Query: 473 acagttcctccaatcctcagtgctctcagttccattgttgaggggatgagaacaggagct 532
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 676 acagttcctccaatcctcagcgctctcagttccattgttgaggggatgagaacaggagct 735

                                                                       
Query: 533 cttttcatcctgccacgggcttctacagtaaagtgagagattaaggtgagctgtatccgc 592
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 736 cttttcatcctgccacgggcttctacagtaaagtgggagattaaggtgagctgtatccgc 795

                                                    
Query: 593 tgtgggctcgtggaaagcagagtgtaaagtcctgtccagtt 633
           ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 796 tgtgggctcgtggaaagcagagtgtaaagtcctgtacagtt 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1036
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1026
Effective search space:   639198
Effective search space used:   639198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)