Query= MSMg01no498_d10.b1 MSMg01no498_d10.b1 CHROMAT_FILE:
MSMg01no498_d10.b1 PHD_FILE: MSMg01no498_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:09 2005
(478 letters)
>mm_chr9_71424870_71425748
Length = 879
Score = 835 bits (432), Expect = 0.0
Identities = 468/480 (97%), Gaps = 3/480 (0%)
Strand = Plus / Plus
Query: 1 acacagagaaacaatgtcaaaaaataaaaataaaaaaaaaggagtggggctatttaactt 60
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 201 acacagagaaacaatgtcaaaaaataaaagtaaaaaaaaatgagtggggctatttaactt 260
Query: 61 gtataaatcttaagtctttttggtgttcaggctgtgtccattttaaccagaaagtgctat 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gtataaatcttaagtctttttggtgttcaggctatgtccattttaaccagaaagtgctat 320
Query: 121 caggacagtggttaacagcatcgtctactcttcccaagaacccaggttagattcctagca 180
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 321 caggacagtggttaacagcatcgtctgctcttcccgagaacccaggttagattcccagca 380
Query: 181 cccacggggcacctcacaaccatttgtaactccagttccagggatctgacaccctcttct 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 cccacggggcacctcacaaccatttataactccagttccagggatctgacaccctcttct 440
Query: 241 ggcctccatgttat-atgcatgtggtacacagacagacatacaggcaaaacgcacatgca 299
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcctccatgg-accatgcatgtggtacacagacagacatacaggcaaaacgcacatgca 499
Query: 300 cataaaataaaaataaacaaaaatttcataaaaaataaaatcagttcctaaagctttggc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cataaaataaaaataaacaaaaatttcataaaaaataaaatcagttcctaaagctttggc 559
Query: 360 taggccttcctggtgctacctggatttccagaacagggtatgtcaggtctagcttgt-ct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 560 taggccttcctggtgctacctggatttccagaacagggtatgtcaggtctagcttgttct 619
Query: 419 tcccacctcctggaatgtccttccaggtgccgttggtgcggcatttcctctccttcagaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcccacctcctggaatgtccttccaggtgccgttggtgcggcatttcctctccttcagaa 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 879
Length adjustment: 10
Effective length of query: 468
Effective length of database: 869
Effective search space: 406692
Effective search space used: 406692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_d10.g1 MSMg01no498_d10.g1 CHROMAT_FILE:
MSMg01no498_d10.g1 PHD_FILE: MSMg01no498_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:09 2005
(354 letters)
>mm_chr9_71620460_71621213
Length = 754
Score = 661 bits (342), Expect = 0.0
Identities = 351/354 (99%)
Strand = Plus / Minus
Query: 1 tgtagacatgaaataaatacatctttaaaaaacatacctctttccctgtggtcctatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgtagacatgaaataaatacatctttaaaaaacatacctctttccctgtggtcctatttc 495
Query: 61 tgtttctggaaacacatctggttaccagttttagacgctctctgggaccgtccctcccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgtttctggaaacacatctggttaccagttttagacgctctctgggaccgtccctcccca 435
Query: 121 cacggattcctcttgtaagcctcctcctggtttgcacggttctgccaatcccggtgttca 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 434 cacggattcctcttgtaagcctcctcctggtttgtacggttctgccaatcccggtgttca 375
Query: 181 gagccatttaggtgcaggttccactgcaggcattttgaggtgtctaaggcatggttaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gagccatttaggtgcaggttccactgcaggcattttgaggtgtctaaggcatggttaaca 315
Query: 241 tgtgtctgcgcctgtgttatatgacaccctttctatcgtccagcacagcctcccttacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgtgtctgcgcctgtgttatatgacaccctttctatcgtccagcacagcctcccttacag 255
Query: 301 tttgcctaattccagatatacccaaaatccatatgtctttgcactggcaagcag 354
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 254 tttgcctaattccagatatacccaaaacccagatgtctttgcactggcaagcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
