NTTGGAGTNCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCAATGAATTTGAATGCACAATATACCCAAACTTTGG
GATGCAATGAAAGTGGTCATAAGAGGAAAGTTTATAGCACTACATATATT
CATAAAGAAATTGAAGAGATCTTATACTAGCAACTTAACAGAACCCTTTT
GAAATCTCCAGAACAAAAAGAAGCAAACACACCTAACAAGAATAGCCATT
GGGTAATAATCAAACTCAGTGCTAAAAATCAATAAAATAGAAACAAGAAG
GAAAATACAAAGAATCAATGAAATAGAGTTATCTTTTTCAGAAAATCAAC
AAGCTCGACAAGCCATTATCCAGGCCAACTAAAAGACAATAGTGAATGTT
CAAATTAACAAAATCAGAAATGAAAAGGAGGACATAACAACAGGCACTAA
GACAAATCCAGAGAAACATAAGAACAGACTTTAAAAATATATACTCCACA
AAATTAGAAAATGCAAAAGAATGGGGAATTTTCTTGATAGATACCACTTA
CAAAAGTTAAATCATGATCAGATAAATAATTAAAATTAACCTATAACCCT
TAAGGAAATAGAAGCAGCCATTAGAAGTCTCTCTACCAAGACATGCCCAG
GGCCAGATAGTTTCAATGCAAAATTCTACCAGACTTTCATAGAAAACCTA
ATATCAATACTCCCTGAATTATTCCACAAAATAGAAATAGG

TTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATTAGAATCACCT
TCATAGATTTCAGGAGGTTTCCACTACACTAGGATTCCACACCACCTCCA
AATGCTCATCCAATTTCAGCCATCTCTCCTCACACACTCCCTTCATCCCA
TAATTCTTCTATCTTGACCTTCCCCAGGCCTTTCCTACTCCTTTCTTTAC
TGGTTTGACTCCAATCTGCCCATAAAAACTACTCTATTTCTTCCTGCAAT
GGATAACCTTGAATCCCTCCTAGACTCTAACCTCTCTGGATTTACTGATT
GTAGTTTTGGAACACCCATGTGACTGTGAGTTTGGGGTACTAAACTCTCC
CATTATTGTTGCTGGCTAATTGTTTTCCTTTATATGTAGGTGACTTTATT
ATTGTTTCAGGTGTTTTTATTTTGAAGATGATTCTGAGTGGTCTTGCCTT
TTTGATGATGCACTTCACTGTGCCTTTTATGTAGTATTTTGTGTTTCATC
TCAACTTTTGTCTTTGCTCATTCAGAGAGATTCCAATTTGCTGTTTTGCC
TTCCTGGAATTTGAGCCTCATAGTCCTAATTGTGTAGATAAAAATAATCT
TCAATTGATGTATGAAATTGATTTCCTTCCTCTTTATATAAACACCACTA
GAAAAGATAAATACTTCTTATTGTTATCTATAAAAT

Query= MSMg01no498_e03.g1 MSMg01no498_e03.g1 CHROMAT_FILE:
MSMg01no498_e03.g1 PHD_FILE: MSMg01no498_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:13 2005
         (614 letters)



>mm_chr9_23439354_23440367
          Length = 1014

 Score = 1149 bits (594), Expect = 0.0
 Identities = 609/614 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcattagaatcaccttcatagatttcaggaggtttccactacactaggattccacaccac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattagaatcaccttcatagatttcaggaggtttccactacactaggattccacaccac 260

                                                                       
Query: 61  ctccaaatgctcatccaatttcagccatctctcctcacacactcccttcatcccataatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctccaaatgctcatccaatttcagccatctctcctcacacactcccttcatcccataatt 320

                                                                       
Query: 121 cttctatcttgaccttccccaggcctttcctactcctttctttactggtttgactccaat 180
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctatcttgaccttcctcaggcctttcctactcctttctttactggtttgactccaat 380

                                                                       
Query: 181 ctgcccataaaaactactctatttcttcctgcaatggataaccttgaatccctcctagac 240
           |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ctgcccataaaatctattctatttcttcctgcaatgggtaaccttgaatccctcctagac 440

                                                                       
Query: 241 tctaacctctctggatttactgattgtagttttggaacacccatgtgactgtgagtttgg 300
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 tctaacctctctggatttactgattgtagttttggaacacccatgtgattgtgagtttgg 500

                                                                       
Query: 301 ggtactaaactctcccattattgttgctggctaattgttttcctttatatgtaggtgact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtactaaactctcccattattgttgctggctaattgttttcctttatatgtaggtgact 560

                                                                       
Query: 361 ttattattgtttcaggtgtttttattttgaagatgattctgagtggtcttgcctttttga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttattattgtttcaggtgtttttattttgaagatgattctgagtggtcttgcctttttga 620

                                                                       
Query: 421 tgatgcacttcactgtgccttttatgtagtattttgtgtttcatctcaacttttgtcttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgatgcacttcactgtgccttttatgtagtattttgtgtttcatctcaacttttgtcttt 680

                                                                       
Query: 481 gctcattcagagagattccaatttgctgttttgccttcctggaatttgagcctcatagtc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctcattcagagagattccaatttgctgttttgccttcctggaatttgagcctcatagtc 740

                                                                       
Query: 541 ctaattgtgtagataaaaataatcttcaattgatgtatgaaattgatttccttcctcttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctaattgtgtagataaaaataatcttcaattgatgtatgaaattgatttccttcctcttt 800

                         
Query: 601 atataaacaccact 614
           ||||||||||||||
Sbjct: 801 atataaacaccact 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)