Query= MSMg01no498_e22.b1 MSMg01no498_e22.b1 CHROMAT_FILE:
MSMg01no498_e22.b1 PHD_FILE: MSMg01no498_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:16 2005
(589 letters)
>mm_chr9_84139396_84140388
Length = 993
Score = 804 bits (416), Expect = 0.0
Identities = 425/430 (98%), Gaps = 4/430 (0%)
Strand = Plus / Minus
Query: 5 gaattctgcaagccagatgtgtccaagaaaacttagaaacagccttcctcc----ctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 430 gaattctgcaagccagatgtgtccaagaaaacttagaaacagccttcctccctggctatg 371
Query: 61 atcaaattattatatagtaaattgaaccgtaacagaagtgcattagaagcctggaagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atcaaattattatatagtaaattgaaccgtaacagaagtgcattagaagcctggaagcat 311
Query: 121 aaatatagcacatctctcaccaaagtgatagctactcctcccaactcatcagcatggtta 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aaatatagtacatctctcaccaaagtgatagctactcctcccaactcatcagcatggtta 251
Query: 181 aggtgaatgcgtcttcctgagagattctttggccaggtggattaacttatttttttaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aggtgaatgcgtcttcctgagagattctttggccaggtggattaacttatttttttaata 191
Query: 241 ttaatttttggcattttggagattataataaaattatattttcccccttctccttcctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttaatttttggcattttggagattataataaaattatattttcccccttctccttcctcc 131
Query: 301 ttctaaactttcctacattgcagcctcttgcttgctttcaaatcataatagttattcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttctaaactttcctacattgcagcctcttgcttgctttcaaatcataatagttattcatt 71
Query: 361 aattattattgtttgaatatatgtatatggatatatattcatatacatatatatattcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 aattattattgtttgaatatatgtatatggatatatattcatatacatatatatattcct 11
Query: 421 aaatataatc 430
||||||||||
Sbjct: 10 aaatataatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 993
Length adjustment: 10
Effective length of query: 579
Effective length of database: 983
Effective search space: 569157
Effective search space used: 569157
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_e22.g1 MSMg01no498_e22.g1 CHROMAT_FILE:
MSMg01no498_e22.g1 PHD_FILE: MSMg01no498_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:17 2005
(465 letters)
>mm_chr9_83964625_83965489
Length = 865
Score = 884 bits (457), Expect = 0.0
Identities = 463/465 (99%)
Strand = Plus / Plus
Query: 1 attataaaattgcgtgtttctataaagaaatcattcaatgagtgaactacaaggtgaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attataaaattgcgtgtttctataaagaaatcattcaatgagtgaactacaaggtgaatt 260
Query: 61 aggtaatgctgtaaaatttgtaggggatttgcatctaattagaactttgtttcatcttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtaatgctgtaaaatttgtaggggatttgcatctaattagaactttgtttcatcttaa 320
Query: 121 ttcgttttatttgtctagacacagaatgcagaaaatgaatttaaataggtcttaccagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcgttttatttgtctagacacagaatgcagaaaatgaatttaaataggtcttaccagag 380
Query: 181 agtatatttgcctcttactgcttttactgattgatgaaggaagttacagatatgggcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtatatttgcctcttactgcttttactgattgatgaaggaagttacagatatgggcttt 440
Query: 241 gtcctttttagtaatatgtttaagaacaagctgatgtggttttagcagttgtttttcacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcctttttagtaatatgtttaagaacaagctgatgtggttttagcagttgtttttcacg 500
Query: 301 ggtgcagctacaggaggtgggcactcaaagcctcctgtcagtgaaacctggatcaggtta 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgcagctacaggaggtgggcactcacagcctcctgtcagtgaaacctggatcaggtta 560
Query: 361 ctggtgccatgggctgcttgaattggtgtcactgaagtgagtttcagctgctttcaccac 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggtgccacgggctgcttgaattggtgtcactgaagtgagtttcagctgctttcaccac 620
Query: 421 ttggagtgattcatacttctacatttctttttgatgtttggacct 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttggagtgattcatacttctacatttctttttgatgtttggacct 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|