Query= MSMg01no500_b15.b1 MSMg01no500_b15.b1 CHROMAT_FILE:
MSMg01no500_b15.b1 PHD_FILE: MSMg01no500_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:41 2005
(114 letters)
>mm_chr9_83247683_83248196
Length = 514
Score = 201 bits (104), Expect = 1e-56
Identities = 111/114 (97%)
Strand = Plus / Minus
Query: 1 gagcttgncgcagnctcccattatgggcaggagccacctcacatggcttaaatttatccc 60
||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 314 gagcttgtcgcagtctcccattatgggcaggagccaccacacatggcttaaatttatccc 255
Query: 61 tcacattttataagcatctaattttccttagcttggaaatattttgagggagaa 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tcacattttataagcatctaattttccttagcttggaaatattttgagggagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 514
Length adjustment: 8
Effective length of query: 106
Effective length of database: 506
Effective search space: 53636
Effective search space used: 53636
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no500_b15.g1 MSMg01no500_b15.g1 CHROMAT_FILE:
MSMg01no500_b15.g1 PHD_FILE: MSMg01no500_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:41 2005
(270 letters)
>mm_chr9_83028514_83029184
Length = 671
Score = 485 bits (251), Expect = e-142
Identities = 265/273 (97%), Gaps = 7/273 (2%)
Strand = Plus / Plus
Query: 1 cacttatttctcataacactgcttcacttaactatagagcccaaagagcataaaacccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttatttctcataacactgcttcacttaactatagagcccaaagagcataaaacccac 260
Query: 61 agctcaaacctggcacagccaggcactcaatactgttagttatttaaatctgaacaatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctcaaacctggcacagccaggcactcaatactgttagttatttaaatctgaacaatac 320
Query: 121 tacagatgcccatgttcattactgatatcaattccattttaaagatggaagccattttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacagatgcccatgttcattactgatatcaattccattttaaagatggaagccattttct 380
Query: 181 ctatttccctacttccg----aatgtaagtgtcactttctgtatgtgtggccaagcatgc 236
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctatttccctactt---ttttaatgtaagtgtcactttctgtatgtgtggccaagcatgc 437
Query: 237 gtttctcttgggcacacctacaaggctgctcct 269
||||||||||||||||||||||||||||||||
Sbjct: 438 atttctcttgggcacacctacaaggctgctcct 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 671
Length adjustment: 9
Effective length of query: 261
Effective length of database: 662
Effective search space: 172782
Effective search space used: 172782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
