Query= MSMg01no501_a02.b1 MSMg01no501_a02.b1 CHROMAT_FILE:
MSMg01no501_a02.b1 PHD_FILE: MSMg01no501_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:45 2005
(659 letters)
>mm_chr9_52957841_52958897
Length = 1057
Score = 1185 bits (613), Expect = 0.0
Identities = 645/657 (98%), Gaps = 6/657 (0%)
Strand = Plus / Minus
Query: 5 gaattccattatcagaatatccattaaggctttttttttttttaaacttgaagaaagcca 64
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 857 gaattccattatcagaatatccattaaagc---ttttttttttaaacttgaagaaagcca 801
Query: 65 tgcatgataacgcagggcacagatagaaaagtacccaccagacagcgct-tctcactttc 123
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 800 tgcatgataacgcagggcacagatagaaaagtacccaccagacagcg-tgtctcactttc 742
Query: 124 atattgacagtggatttagtgtaataatgacacatgatagaagtatctccatactacgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atattgacagtggatttagtgtaataatgacacatgatagaagtatctccatactacgtg 682
Query: 184 ggaggaaaactgcatttttacatggacttagtcatttacccaaattaaaaactgtaagtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaggaaaactgcatttttacatggacttagtcatttacccaaattaaaaactgtaagtt 622
Query: 244 attacctacagatttttggttgagaatagactttttagtgtttggagaagattggttgct 303
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 621 attacctacagatttttggttgagaatagactttttagtgtttgtagaagattggctgct 562
Query: 304 tttgtaagcttaaaatgacattctcttttactttagtgaatcattttgtcttgaacttta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgtaagcttaaaatgacattctcttttactttagtgaatcattttgtcttgaacttta 502
Query: 364 atactgtatgttcccccacccccattttttaaaaacctattttgtgatcagtggaaaact 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atactgtatgtccccccacccccattttttaaaaacctattttgtgatcagtggaaaact 442
Query: 424 agtggtgaaattataaagcaatttaataaaatgtttcat-agaatgaccctttattgttt 482
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 agtggtgaaattataaagcaatttaataaaatgtttcataagaatgaccctttattgttt 382
Query: 483 ttgaataaatattattcctaagaaccaaaggtgagaattttgtctttaatattttgtaat 542
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaataaatatttttcctaagaaccaaaggtgagaattttgtctttaatattttgtaat 322
Query: 543 ttctgttcagactgaggacaagggaaacaatcatgattgtatttttccttcttttttatt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgttcagactgaggacaagggaaacaatcatgattgtatttttccttcttttttatt 262
Query: 603 ctagtagatgaaattgtgtactagttgtgtatcagatattgtacttataatctatat 659
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagtagatgacattgtgtactagttgtgtatcagatattgtacttataatctatat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1057
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1047
Effective search space: 679503
Effective search space used: 679503
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_a02.g1 MSMg01no501_a02.g1 CHROMAT_FILE:
MSMg01no501_a02.g1 PHD_FILE: MSMg01no501_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:45 2005
(643 letters)
>mm_chr9_52779608_52780650
Length = 1043
Score = 1236 bits (639), Expect = 0.0
Identities = 642/643 (99%)
Strand = Plus / Plus
Query: 1 agtaagttccaaatatttttaaatgacatatccaaaagaatatgacttttttattagtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaagttccaaatatttttaaatgacatatccaaaagaatatgacttttttattagtag 260
Query: 61 aggtaagaatctgtaaccattgcttttaacatcacctagaatattgttcccaaattttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtaagaatctgtaaccattgcttttaacatcacctagaatattgttcccaaattttgt 320
Query: 121 ccagcaaaatattgctgccatgaaatcgttcatgaatctcaagttctgtggtcaaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagcaaaatattgctgccatgaaatcgttcatgaatctcaagttctgtggtcaaattta 380
Query: 181 ttaggaaaatgctgtttaataaaacaccccagagatacacagtgcataatcaggaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaggaaaatgctgtttaataaaacaccccagagatacacagtgcataatcaggaccaag 440
Query: 241 tatctaagtcagaatcccatcaatctcacacaacgaaatttcatcttgaaaagatcactc 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 tatctaagtcagaatcccatcaatcttacacaacgaaatttcatcttgaaaagatcactc 500
Query: 301 ttgctgggagtgaagaatggaagagagcatgcaggacaatggcaaggacatgaattagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgctgggagtgaagaatggaagagagcatgcaggacaatggcaaggacatgaattagga 560
Query: 361 ccactgtggccatctagggaaagatgatggctgcctaacaaaggtggtataaaatggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccactgtggccatctagggaaagatgatggctgcctaacaaaggtggtataaaatggaaa 620
Query: 421 tggtcaacttctggagagaatggggaaggtgacaagggacatgtcagagtcagtgatgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggtcaacttctggagagaatggggaaggtgacaagggacatgtcagagtcagtgatgta 680
Query: 481 ccccaggtacctggcctagacaatgagttcagaggcaatactctcagaagaaatggatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccccaggtacctggcctagacaatgagttcagaggcaatactctcagaagaaatggatta 740
Query: 541 caagagcaaaagtgggttaggcaaagaggagttgtgcttacactaatgtttctttgcaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caagagcaaaagtgggttaggcaaagaggagttgtgcttacactaatgtttctttgcaat 800
Query: 601 tgagaaagcccatttcagctggccagcataagaactgggtgtg 643
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgagaaagcccatttcagctggccagcataagaactgggtgtg 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|