Query= MSMg01no501_e05.b1 MSMg01no501_e05.b1 CHROMAT_FILE:
MSMg01no501_e05.b1 PHD_FILE: MSMg01no501_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:04 2005
(606 letters)
>mm_chr9_21918858_21919863
Length = 1006
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%)
Strand = Plus / Minus
Query: 359 ctgtaaacctttattaacatgggttttttaatttatttttatcatatatagagagataga 418
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 806 ctgtaaacctttattaacatgggttttttaatttatttttatcatatatatagagataga 747
Query: 419 cgctttgcctgcatatatgtctgtgtacttcctttgttttgtcttgttttagacagtaga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cgctttgcctgcatatatgtctgtgtacttcctttgttttgtcttgttttagacagtaga 687
Query: 479 tttaaattggttttgttgcctacactggcctccagctttcagtaacctgaagtgctggga 538
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Sbjct: 686 tttaaattggttttgttgcctacactggcctccagctttcagtaacctgaagtgctggga 627
Query: 539 gctgcagagtgggctgggctagctcagactagactccaactgagatgagttttccaccct 598
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gttgcagagtgggctgggctagctcagactagactccaactgagatgagttttccaccct 567
Query: 599 cctccctg 606
||||||||
Sbjct: 566 cctccctg 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_e05.g1 MSMg01no501_e05.g1 CHROMAT_FILE:
MSMg01no501_e05.g1 PHD_FILE: MSMg01no501_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:04 2005
(475 letters)
>mm_chr9_21784520_21785393
Length = 874
Score = 895 bits (463), Expect = 0.0
Identities = 472/475 (99%), Gaps = 1/475 (0%)
Strand = Plus / Plus
Query: 1 cacatctgccagccagcttttaccaactgagcccctctccccatctccatacacttggga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 cacatctgccagccagcttttaccaactgagcccctctccccatctccatactcttggga 260
Query: 61 tatttgagacagtctcacatagttccacactagtcttgttatatcaccctggctagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttgagacagtctcacatagttccacactagtcttgttatatcaccctggctagcttg 320
Query: 121 ctgtgtagactaggctgacctcgaattcacagtgatcctcctgcctcagcctcccaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgtagactaggctgacctcgaattcacagtgatcctcctgcctcagcctcccaagtg 380
Query: 181 gtgttgttacaaatatgaatcccttgaattcgggggttcctaatacctgggaaagaatcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgttgttacaaatatgaatcccttgaattcgggggttcctaatacctgggaaagaatcg 440
Query: 241 ctcgttctgctgagatggttatcctcatcagaaaaaatctgtgacagtttcctgaaaaca 300
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcgg-ctgctgagatggttatcctcatcagaaaaaatctgtgacagtttcctgaaaaca 499
Query: 301 gacagcggttccctgtaggggtgagaggggcacagtcaggctcagcgggggtgggagtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gacagcggttccctgtaggggtgagaggggcacagtcaggctcagcgggggtgggagtgg 559
Query: 361 ggaggggggcacctgggatagggcatactgtgcatgacatccaactcaccggctcacagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggaggggggcacctgggatagggcatactgtgcatgacatccaactcaccggctcacagc 619
Query: 421 tccccagctgcgcttgagtctgtagatggggttagattgcagggcggacaggatc 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tccccagctgcgcttgagtctgtagatggggttagattgcagggcggacaggatc 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 874
Length adjustment: 10
Effective length of query: 465
Effective length of database: 864
Effective search space: 401760
Effective search space used: 401760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
