Query= MSMg01no503_j12.b1 MSMg01no503_j12.b1 CHROMAT_FILE:
MSMg01no503_j12.b1 PHD_FILE: MSMg01no503_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:55 2005
(468 letters)
>mm_chr9_71639851_71640718
Length = 868
Score = 638 bits (330), Expect = 0.0
Identities = 351/358 (98%), Gaps = 1/358 (0%)
Strand = Plus / Minus
Query: 1 atacatacaggcaggcagaacactcacacatgcaaaataaataaatcttcaaaactttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 358 atacatacaggcaggcagaacactcacacatgcaaaataaataaatcttcaaaacttcca 299
Query: 61 taaagaatacttaacacagctcaggggaagggttgcttggctcatagtttcacagctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 taaagaatacttaacacagctcaggggaagggttgcttggctcatagtttcacagctcag 239
Query: 121 tcccacatccttggctccctcggcttgaggcaggcaggacatcacagtgacagtggcagc 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 238 tcccacatccttggctccctcggcctgaggcaggcaggacatcacagtgacagtggcagc 179
Query: 181 atgaaagccgagaaagaaggggtcaggagaaggctgccccagtgacctacttcctccagc 240
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 178 atgaaagcggagaaagaaggggtcaggagaaggctgcctcagtgacctacttcctccagc 119
Query: 241 taggcctctcttcctcaagtttccaccatatccccaagtagcacccccagctggagacca 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 taggcctcacttcctcaagtttccaccatatccccaagtagcacccccagctggagacca 59
Query: 301 gcattcaacactagagcctttagtagtcatcccccc-cacactggttattcttaattt 357
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 58 gcattcaacaccagagcctttagtagtcatccccccacacactggttattcttaattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_j12.g1 MSMg01no503_j12.g1 CHROMAT_FILE:
MSMg01no503_j12.g1 PHD_FILE: MSMg01no503_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:55 2005
(241 letters)
>mm_chr9_71474975_71475615
Length = 641
Score = 437 bits (226), Expect = e-127
Identities = 238/242 (98%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 1 ctgtgtgttctggggaaccagccaaccaatcgcaggccatcacattcccaagaggacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtgtgttctggggaaccagccaaccaatcgcaggccatcacattcccaagaggacaga 260
Query: 61 ggttctccgaggctgagtatagagaggttcaggctgcaccacactctgctggatggttac 120
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 261 ggttctccgaggctgagtatagagaggttcaggctgcatcacactctcctggatggttac 320
Query: 121 aggagggcagggttggttgggtttttt-gagacggggcctcctatataacccagcttggc 179
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 aggagggcagggttggttgggtttttttgagacggggcctcctatataacccagcttggc 380
Query: 180 caagacctgcatatgtatccaaggctgactttgaactctggatcctcctgctgccacttc 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 caagacctgcatatgtatccaaggctgactttgaactctggatcctcctgttgccacttc 440
Query: 240 ct 241
||
Sbjct: 441 ct 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
