Query= MSMg01no503_n18.b1 MSMg01no503_n18.b1 CHROMAT_FILE:
MSMg01no503_n18.b1 PHD_FILE: MSMg01no503_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:16 2005
(557 letters)
>mm_chr9_79766984_79767940
Length = 957
Score = 1069 bits (553), Expect = 0.0
Identities = 556/557 (99%)
Strand = Plus / Minus
Query: 1 gttcatttctttagcagtgtatctgagagaggaggtagggagggacagaggacgtcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gttcatttctttagcagtgtatctgagagaggaggtagggagggacagaggacgtcactg 698
Query: 61 ccgccctatcttttctctcagtctgttcttattttcaaattacagcgagctggggacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ccgccctatcttttctctcagtctgttcttattttcaaattacagcgagctggggacaga 638
Query: 121 atgaaaacgggtagagactgtccagcttagatgtacccattaagcaagtttgttacagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atgaaaacgggtagagactgtccagcttagatgtacccattaagcaagtttgttacagct 578
Query: 181 tagatccaggttgataaactaagggctaaagatcagacagagtcacatcggacgacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tagatccaggttgataaactaagggctaaagatcagacagagtcacatcggacgacttct 518
Query: 241 ctgctgtctgtgatttcctgttgcatggagctgagtagaaataccagaagccagatagcg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 517 ctgctgtctgtgatttcctgttgcatggagctgagtagaaataccagaagccagatagtg 458
Query: 301 ctgcaaagtgcaacatgcttactgtcgacagacacagcttgtcaaccccagtcctagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ctgcaaagtgcaacatgcttactgtcgacagacacagcttgtcaaccccagtcctagatg 398
Query: 361 ttcacagaacataaagtgaccctgtccctcctgcttaactatatggcagtgcctgaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttcacagaacataaagtgaccctgtccctcctgcttaactatatggcagtgcctgaaacc 338
Query: 421 ttagctgttaagctgtcacagggcagggattcctgccataacactactgggaaggaccgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttagctgttaagctgtcacagggcagggattcctgccataacactactgggaaggaccgt 278
Query: 481 cacacacacaagtttgtggcttgtggcttcacgccatccagtgggtaatgtgtctgaact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cacacacacaagtttgtggcttgtggcttcacgccatccagtgggtaatgtgtctgaact 218
Query: 541 ttatcatcctctcttaa 557
|||||||||||||||||
Sbjct: 217 ttatcatcctctcttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_n18.g1 MSMg01no503_n18.g1 CHROMAT_FILE:
MSMg01no503_n18.g1 PHD_FILE: MSMg01no503_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:16 2005
(490 letters)
>mm_chr9_79564786_79565674
Length = 889
Score = 932 bits (482), Expect = 0.0
Identities = 488/490 (99%), Gaps = 1/490 (0%)
Strand = Plus / Plus
Query: 1 cgttcgtatacgttttaaagaaaaacttctctctccttcttagccaaaacatttatcgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgttcgtatacgttttaaagaaaaacttctctctccttcttagccaaaacatttatcgga 260
Query: 61 gtgcttagcaacacttcattgagcattctcagacatagatgtctgaaagcggtagccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcttagcaacacttcattgagcattctcagacatagatgtctgaaagcggtagccctt 320
Query: 121 acgtggcagtaggatttccctcacttcccctcatgaatgaaaatgaatcaactgcccgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acgtggcagtaggatttccctcacttcccctcatgaatgaaaatgaatcaactgcccgga 380
Query: 181 gtgggggcactatgggaactggtctctttcggacaacttgcccctcccccaccccttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgggggcactatgggaactggtctctttcggacaacttgcccctcccccaccccttgct 440
Query: 241 ggaaggagccaacttcttaactctctcaatttaacttttttttttcaaacgcacacacag 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ggaaggagccaacttcttaactctctcaatttaacttttttttt-caaacgcacacacag 499
Query: 301 gcacacaaatgtttcgtgggcccatctagagtccaggcgtcacctacgtcttctataaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcacacaaatgtttcgtgggcccatctagagtccaggcgtcacctacgtcttctataaag 559
Query: 361 gctacctagccaaggatgagcttagacttgtttcttcgcccccctcccccaatcctaccc 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctacctagccaaggacgagcttagacttgtttcttcgcccccctcccccaatcctaccc 619
Query: 421 cagtattctttagaagaccctaaccttggagctgagaggaggtgtatgccaaagatctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagtattctttagaagaccctaaccttggagctgagaggaggtgtatgccaaagatctga 679
Query: 481 attggtcagg 490
||||||||||
Sbjct: 680 attggtcagg 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 889
Length adjustment: 10
Effective length of query: 480
Effective length of database: 879
Effective search space: 421920
Effective search space used: 421920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
