Query= MSMg01no503_o22.b1 MSMg01no503_o22.b1 CHROMAT_FILE:
MSMg01no503_o22.b1 PHD_FILE: MSMg01no503_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:22 2005
(662 letters)
>mm_chr9_24901580_24902640
Length = 1061
Score = 1220 bits (631), Expect = 0.0
Identities = 649/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 8 gaattctcaacatgtgcatcagagagacatttttatggatcgggcaaaaataaatgtttt 67
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctcaacatgtgaatcagagagacatttttatggatcgggcaaaaataaatgtttt 267
Query: 68 atctctgggatgtacctggttttgagagcacaactctggagcaagggtctgatggtaaaa 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atctctgggatgtacctggttttgagagcacaactctggagcaagggtctgatggtaaaa 327
Query: 128 acatacacaggactccaaggacttacataaggttttgtctatttgtgttttactgtaaaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acatacacaggactccaaggacttacataaggttttgtctatttgtgttttactgtaaaa 387
Query: 188 ctatgtagacaaataagctaggactacttaaagacaatcctggtagggatgactcaagaa 247
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctatgtagacaaataaactaggactacttaaagacaatcctggtagggatgactcaagaa 447
Query: 248 ggctgtggtcatgtcaagttgcattgacatgacaaataaaacacagcaattacaatatgc 307
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggctgtggtcatgtcaagctgcattgacatgacaaataaaacacagcaattacaatatgc 507
Query: 308 tgcaatggaagttctgtggctgtgcttgttcctactgtgctgttcttgccctgcctatgt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgcaatggaagttctgtggctgtgcttgttcctactgtgctgttcttgccctgcctatgt 567
Query: 368 gctgatgtgtgcagatgtgggaagggggcaacaggcaccgtgacgtcccattaggctgtt 427
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 568 gctgatgtgtgcagatgtgggaagggggcaacaggcactgtgacgtcccattaggctgtt 627
Query: 428 atacagggccacttgaacactaccactgcagcaacaacacagagcagtgtactgcctaaa 487
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 628 atacagggccacttgaacactaccactgca-caacaacacagagcagtgtactgcctaaa 686
Query: 488 acttgtgcttatctcactggggactcttccatttaacattttctgtgtacagtaaccaaa 547
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 687 acttgtgcttatctcactggggactcttccatttaatattttctgtgtacagtaaccaaa 746
Query: 548 accacagaaggtagagcatagcagactatcacaggccacacaggcatgccttcacacccc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 accacagaaggtagagcatagcagactatcacaggccacacaggcatgccttcacacccc 806
Query: 608 caggagggactcggtgagactgactcgcttccaccttataattcgaccatgttgg 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 caggagggactcggtgagactgactcgcttccaccttataattcgaccatgttgg 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1061
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1051
Effective search space: 685252
Effective search space used: 685252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_o22.g1 MSMg01no503_o22.g1 CHROMAT_FILE:
MSMg01no503_o22.g1 PHD_FILE: MSMg01no503_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:22 2005
(642 letters)
>mm_chr9_24961607_24962648
Length = 1042
Score = 1139 bits (589), Expect = 0.0
Identities = 628/641 (97%)
Strand = Plus / Minus
Query: 1 aagggtttgagagcagctcaggcaacacagcaaaccatatacagaccaaaagtaaaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aagggtttgagagcagctcaggcaacacagcaaaccatatacagaccaaaagtaaaatct 582
Query: 61 gtgtttaggttttcaatagcacagctccctccatctctgaaagaacgcagacattccttt 120
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 581 gtgtttaggttttcaatagcacagctccctccatctctgcaagaactcagacattccttt 522
Query: 121 gtagttgtaatggaagtattctggtctctgactgtggctgatgctggaacttactttctt 180
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 521 ttagttgtaatggaagtattctggtctctgactgtggctggtgttggaacttactttctt 462
Query: 181 cctagagcagctcaagtgcacaagtctctctcatgtcatcttacagtcatcggaatggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cctagagcagctcaagtgcacaagtctctctcatgtcatcttacagtcatcggaatggct 402
Query: 241 ggagtgggcaagtgggtcagtcagccatgtggaccacctgcttcatctcctcaccagcac 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 401 ggagtgggcaagtgggtcagtcagccatgtggaccacctgcttcatctcctcaccatcac 342
Query: 301 actcagaagaaactctaattgcaatacccctataccacagatctccagctctacatctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 actcagaagaaactctaattgcaatacccctataccacagatctccagctctacatctta 282
Query: 361 ctgcaaaaaggctcagtgaaaggatatggccagctctgaaaactaaattctgtatttgcc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctgcaaaaaggctcagtgaaaggatatggccagctctgaaaactaaattctgtatttgct 222
Query: 421 caggttgaataaaacagggtcaaatcacacaatattttgaacacaagggttcaatgtaaa 480
|||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 221 caggttgaataaaaaagggtcaaatcacacaatatttcaaacacaagggttcaatttaaa 162
Query: 481 gaactgctacttgtcacaaggacatagagcagcaaggggatggctagaaaggatcaagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gaactgctacttgtcacaaggacatagagcagcaaggggatggctagaaaggatcaagca 102
Query: 541 aaatcctaaagaatacaggaataatacaaatatggaggagtcactcccctcacgactgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 aaatcctaaagaatacaggaataatacaaatatggaggagtcactcccctcacgactgac 42
Query: 601 tcagtcacacagaacactccagtaagtgtggctcactggat 641
||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 41 tcagtcacacagaacactccagtgagtgtggttcactggat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
