NNNAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAGGTGTTTGCCGGGGCAGTAGCAGTCGCTGGCGTGGGTG
GAGGGTAATGCCAAGAGCCCTCCCTGCCCTCTGATTATTCTATTGGAGTA
GTCTGAGTCCTTTGACTACTTTGGCTTTGGAGCGCAGTGGCATGATCACG
TGAACTTCATTCTGGCCAGATGAGTTATGTCAATGGGGTCTGGGAGATGA
GGCGGCCCGGGGGTGGAGCAAAGGCAGACTCCACCAGTCCTGTCTCCAGG
AGCTGTACCAAAAGCAAATATTTGGAGGCTGGGATTGCTTAGCTCTCTCC
TTGGAATCAGCAGACTCTCTGAGGCTGGGATTAATTTGAAGAAATTTACT
AGCAGAGTTTGTGGCAGATAAAACAGTTTGCTTATTTCACACTTGTGTGG
CCACCTGCTAGGAACTGTTTGTTCGGTTTCGAATTCTTTAATTAAAATCA
ACATAAAACAGATTGAAAACATCCCAAGAAGGGGATGCTTGGTTTGCTGG
AGGATATTGCAGAAAGATGGAGTAAAGTGGTTAAAAAACAAAAAACAAAC
AAAAAAAACCCCCCAAAAAACAAAAACAAAAAAACCATAAAAACAACCCC
CCCCAACTGATTTGCTACCAAACAAGCCGGCAGGTAGAAAAGCACAGGGT
GGGTGGGGTCAGGCTTGTGCACGTGTGTATGTGCCGGAGCTGC

NTTTTCTATGCTGTGNGTTTCCTGGCGGCCGCCTTGGTCATTTCTTTAGG
TGACCTATAGAAGTTGCTGCGGAGTTTCTTACTATCCTTGGATCCCCTGA
AATTACTATACTGGAGGGATGGGTGTTATGGTGTGGTGTGGTGTGGGGTG
GGGTCGTGTGTTTTTTTTTTTTTNNTGTNNTTTTTTTTTTTTNNNTTNNT
TTTTTTNTGTTTTTTTTTTTGTGTGTTGGTNTGTGGGTTTTTTTTTTTTT
TTTTTTTTGNGGGGGGGTGGGGGGGGNTTGGGGTTTTTGTTGNGTGGNGG
GCTTGNGNNNNNTTTTTTCTGCTTTTCCCCCCCTCCGCGGCCCCCCCCCC
CCCTTTTTTTTTTCTTTCCTTGTGCTTTCTTTTTTTCTTTTTTTTTTCTT
TTTTTTTGCCCCCCTCGTTTTTTTTTTTTTTTTTTTCTTTCCTCTTTTTT
CTCTTTTTTTTTTCTCCTCTTCTTTCTTTTTTTTTTTTTCTTCCCCTCCC
TCTTTTTTCCTCTTTTTTTTTTCTTTCTCCTCTTTTTCTTTTCCTTTCTC
TTTTTCCTTTCTTTTCTCTTTTTCTTTTTTTTTTTTTTTTTCCTCCTCCC
TTTTTTTTTTCCTTTTTTTTTTTTCTTTCTTTTCTTTCCNTTTTTTTCTT
TCCTTTTCTNTCTCTCTCTTCCTCTCTTTTTTTTTTTTCTTTGCCTTCTT
TGNTCCTCCCTTCCTTCTTTTTTTTTTTTCTTTTTTCTTCTTTTTTTCTT
TTTCTTTTCTTTTTTTCTTTCTCCTCTCTTTTCCGTTTCCCTC

Query= MSMg01no504_l19.b1 MSMg01no504_l19.b1 CHROMAT_FILE:
MSMg01no504_l19.b1 PHD_FILE: MSMg01no504_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:26 2005
         (669 letters)



>mm_chr9_46185081_46186149
          Length = 1069

 Score = 1272 bits (658), Expect = 0.0
 Identities = 668/674 (99%), Gaps = 6/674 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cggggcagtagcagtcgctggcgtgggtggagggtaatgccaagagccctccctgccctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggggcagtagcagtcgctggcgtgggtggagggtaatgccaagagccctccctgccctc 260

                                                                       
Query: 61  tgattattctattggagtagtctgagtcctttgactactttggctttggagcgcagtggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgattattctattggagtagtctgagtcctttgactactttggctttggagcgcagtggc 320

                                                                       
Query: 121 atgatcacgtgaacttcattctggccagatgagttatgtcaatggggtctgggagatgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgatcacgtgaacttcattctggccagatgagttatgtcaatggggtctgggagatgag 380

                                                                       
Query: 181 gcggcccgggggtggagcaaaggcagactccaccagtcctgtctccaggagctgtaccaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcggcccgggggtggagcaaaggcagactccaccagtcctgtctccaggagctgtaccaa 440

                                                                       
Query: 241 aagcaaatatttggaggctgggattgcttagctctctccttggaatcagcagactctctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcaaatatttggaggctgggattgcttagctctctccttggaatcagcagactctctg 500

                                                                       
Query: 301 aggctgggattaatttgaagaaatttactagcagagtttgtggcagataaaacagtttgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggctgggattaatttgaagaaatttactagcagagtttgtggcagataaaacagtttgc 560

                                                                       
Query: 361 ttatttcacacttgtgtggccacctgctaggaactgtttgttcggtttcgaattctttaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttatttcacacttgtgtggccacctgctaggaactgtttgttcggtttcgaattctttaa 620

                                                                       
Query: 421 ttaaaatcaacataaaacagattgaaaacatcccaagaaggggatgcttggtttgctgga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaaaatcaacataaaacagattgaaaacatcccaagaaggggatgcttggtttgctgga 680

                                                                       
Query: 481 ggatattgcagaaagatggagtaaagtggttaaaaaacaaaaaacaaacaaaaaaaaccc 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 ggatattgcagaaagatggagtaaagtggttaaaaaacaaaaaacaaacaaaaaaa-ccc 739

                                                                       
Query: 541 cccaaaaaacaaaaacaaaaaaaccataaaaacaac-----cccccccaactgatttgct 595
           ||||||||||||||||||||||||||||||||||||     |||||||||||||||||||
Sbjct: 740 cccaaaaaacaaaaacaaaaaaaccataaaaacaacacccccccccccaactgatttgct 799

                                                                       
Query: 596 accaaacaagccggcaggtagaaaagcacagggtgggtggggtcaggcttgtgcacgtgt 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 accaaacaagccggcaggtagaaaagcacagggtgggtggggtcaggcttgtgcacgtgt 859

                         
Query: 656 gtatgtgccggagc 669
           ||||||||||||||
Sbjct: 860 gtatgtgccggagc 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space:   697881
Effective search space used:   697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)