Query= MSMg01no507_e04.b1 MSMg01no507_e04.b1 CHROMAT_FILE:
MSMg01no507_e04.b1 PHD_FILE: MSMg01no507_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:44 2005
(619 letters)
>mm_chr9_7642471_7643489
Length = 1019
Score = 1166 bits (603), Expect = 0.0
Identities = 612/615 (99%)
Strand = Plus / Minus
Query: 5 gaattccgttataaaaaggttaacttactgcttaaaaataaagttgctttcatacaactc 64
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 gaattccattataaaaaggttaacttactgcttaaaaataaagttgctttcatacaactc 947
Query: 65 agtattatacatgtttagcattttaatcaatgctatgaggaaactaggcttgaaataatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 agtattatacatgtttagcattttaatcaatgctatgaggaaactaggcttgaaataatt 887
Query: 125 tacctatggttacagttaacaatcggtggaaccagcaattgaaactttaatctgattgac 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tacctatggctacagttaacaatcggtggaaccagcaattgaaactttaatctgattgac 827
Query: 185 atcaaagttggaattctatacctgagtgtgtgtgggtgtaccagtctccttcatttgcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 atcaaagttggaattctatacctgagtgtgtgtgggtgtaccagtctccttcatttgcat 767
Query: 245 gtctcacatggaaggtttctagatgatctgcatgacagtctagaaaatttacatcctccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gtctcacatggaaggtttctagatgatctgcatgacagtctagaaaatttacatcctccc 707
Query: 305 caattacactgcttaggagactatcaattcatttcctcagttcatttctaaataaagtgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 caattacactgcttaggagactatcaattcatttcctcagttcatttctaaataaagtgc 647
Query: 365 atttcacatacaggtaaggagccataagtcttgtacacctgagtaagaagcaagctgtgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 atttcacatacaggtaaggagccataagtcttgtacacctgagtaagaagcaagctgtgc 587
Query: 425 attgggaggagactggttctgtagttgaaatgcaaagaaagagagatcaggctagcctat 484
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 586 attgggaggagactggttctgcagttgaaatgcaaagaaagagagatcaggctagcctat 527
Query: 485 agaatcaggttgggagggtctttccccctgtggtggtcccttctggatttttggcttact 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agaatcaggttgggagggtctttccccctgtggtggtcccttctggatttttggcttact 467
Query: 545 tgtttttcctacccagcctccctaattaaagggtggcttgggacgttgaacctcaaggtt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgtttttcctacccagcctccctaattaaagggtggcttgggacgttgaacctcaaggtt 407
Query: 605 tcatgatggaggccc 619
|||||||||||||||
Sbjct: 406 tcatgatggaggccc 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_e04.g1 MSMg01no507_e04.g1 CHROMAT_FILE:
MSMg01no507_e04.g1 PHD_FILE: MSMg01no507_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:44 2005
(632 letters)
>mm_chr9_7607396_7608427
Length = 1032
Score = 1183 bits (612), Expect = 0.0
Identities = 625/632 (98%), Gaps = 5/632 (0%)
Strand = Plus / Plus
Query: 1 atagagactgaaggcccaatagagggccaggccctctgcagaccctgcaaagagactaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atagagactgaaggcccaatagagggccaggccctctgcagaccctgcaaagagactaca 265
Query: 61 gctatcagcttagtgctttaataggactcctgagtatgtgaatgagtgggtctctgattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gctatcagcttagtgctttaataggactcctgagtatgtgaatgagtgggtctctgattc 325
Query: 121 tagtgcctactcttgtggattttttgccttcctgtggcttggtttgcctagctctgatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tagtgcctactcttgtggattttttgccttcctgtggcttggtttgcctagctctgatgt 385
Query: 181 gatagtttttattttattttattttattttgttgtttggtttgctgtcatctcctagaaa 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 386 gatagtttttattttattttatttt-----gttgtttggtttgctgtcatctcctagaaa 440
Query: 241 cctattctttcctaataagagacagaaagagagtggatccagatgggagaagaggtgggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctattctttcctaataagagacagaaagagagtggatccagatgggagaagaggtgggg 500
Query: 301 aggaaccaagagaagaggaaggggcagccgctttcggttatattgtacaagaaaataatc 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 aggaaccaagagaagaggaaggggcagccgctttcggttatattgtacgagaaaataatc 560
Query: 361 tatgtttaataaaaagggaaataaacacaaagagaaaaagaaaaacagcttcttgccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgtttaataaaaagggaaataaacacaaagagaaaaagaaaaacagcttcttgccaaa 620
Query: 421 cagcataaactacccaccaggcactaaactactggaatttcactggcagttagaaccact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcataaactacccaccaggcactaaactactggaatttcactggcagttagaaccact 680
Query: 481 gagataccaccatgctggagcaacagcagtaaaccgagaacttggcctaaaagaaattta 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 681 gagataccaccatgctggagcaacagcagtaaaccaagaacttggcctaaaagaaattta 740
Query: 541 gttcaagttctgccacttagcagttggtggtgtgcaggccatgtcacttctccaagctga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttcaagttctgccacttagcagttggtggtgtgcaggccatgtcacttctccaagctga 800
Query: 601 tcgcctatctatagaatgtctagtgatgttcc 632
||||||||||||||||||||||||||||||||
Sbjct: 801 tcgcctatctatagaatgtctagtgatgttcc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
