Query= MSMg01no507_g06.b1 MSMg01no507_g06.b1 CHROMAT_FILE:
MSMg01no507_g06.b1 PHD_FILE: MSMg01no507_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:55 2005
(631 letters)
>mm_chr9_71970150_71971180
Length = 1031
Score = 615 bits (318), Expect = e-180
Identities = 339/346 (97%)
Strand = Plus / Minus
Query: 3 gaattcagatgctggttccctaaacaaacaagtaaaatccctctgcaccttaaactggta 62
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaattcagatgctggataactaaacaaacaagtaaaatccctctgcaccttaaactggta 287
Query: 63 tgtactatagctgctagaggtccatggaccatccccagtaaaatcacctggaagcttgtc 122
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 286 tgtactatagctactagaggtccatggaccatccccagtaaaatcacctggaagcctgtc 227
Query: 123 tgacctggggagatcgtgcagttggtaaaacatgtcaggcatagttgcctgtgcatgtga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tgacctggggagatcgtgcagttggtaaaacatgtcaggcatagttgcctgtgcatgtga 167
Query: 183 tcacagcaatggccaggaagagcagggattcttttagctagtcagactagcctaattggt 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 166 tcacagcaatggccaggaagagcagggattcttttagctagtcagactagcctacttggt 107
Query: 243 tagtttcaggtccatgagagaccctgtcttaaatactgctgctgctactgctattactgc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tagtttcaggtccatgagagaccctgtcttaaatactgctgctgctactgctattactgc 47
Query: 303 tactggtacaaataataatgatgatgatgataataataataataat 348
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 46 tactggtacaaataataatgatgatgatgatgataataataataat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_g06.g1 MSMg01no507_g06.g1 CHROMAT_FILE:
MSMg01no507_g06.g1 PHD_FILE: MSMg01no507_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:55 2005
(616 letters)
>mm_chr9_71771178_71772194
Length = 1017
Score = 756 bits (391), Expect = 0.0
Identities = 610/817 (74%), Gaps = 203/817 (24%)
Strand = Plus / Plus
Query: 3 aactgaggaatcttgaatggtggagaagaacctaaagaaatgttcaaagtccttagtgac 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactgaggaatcttgaatggtggagaagaacctaaagaaatgttcaaagtccttagtgac 60
Query: 63 cagagaaacataaatcaaaatgaccctgagattccaccttacaccactcagaatggctaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagagaaacataaatcaaaatgaccctgagattccaccttacaccactcagaatggctaa 120
Query: 123 gatcaaaacctcaggttactcaacctcgtgtgtccaaaagagggaactggactccctggg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatcaaaacctcaggttactcaacctcgtgtgtccaaaagagggaactggactccctggg 180
Query: 183 actggagttaaaggtacttgtgaaccatctgatttatgtgcctgaaaatggacttggctc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actggagttaaaggtacttgtgaaccatctgatttatgtgcctgaaaatggacttggctc 240
Query: 243 tttcttcttctagagcatatgtgctctt-------------------------------- 270
|||||||||| |||||||||||||||||
Sbjct: 241 tttcttcttcaagagcatatgtgctcttttttttttttttttaaagatttatttattata 300
Query: 270 ------------------------------------------------------------ 270
Sbjct: 301 tgtaagtacactgtagctgtcttcagacactccagaagagggcgtcagatcttgttacag 360
Query: 270 ------------------------------------------------------------ 270
Sbjct: 361 atggttgtgagccaccatgtggttgctgggatttgaacttcagaccttcggaagagcagt 420
Query: 271 --------------------------------------------------aaccactgag 280
||||||||||
Sbjct: 421 cgggtgctcttacccactgagccatctcaccagcccgcatatgtgctcttaaccactgag 480
Query: 281 tcatctctctagcccttagctctaagagttttactgtgaattccttaagcatttctaaag 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcatctctctagcccttagctctaagagttttactgtgaattccttaagcatttctaaag 540
Query: 341 aaacagccaaatagcctgaaaataaggaattttactttgttacttttctagaattcccaa 400
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 541 aaacagtcaaatagcctgaaaataaggagttttactttgttacttttctagaattcccaa 600
Query: 401 tgcactgctgactataataggtgaaagcaggcagccttgttttagagaaagaatatagga 460
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcactgctgcctataataggtgaaagcaggcagccttgttttagagaaagaatatagga 660
Query: 461 ttggttacttttcatttaaaaaaaaa-caaacccaaaacttttccaagttgaagaagttc 519
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 661 ttggttacttttcatttaaaaaaaaaacaaacccaaaacttttccaagttgaagaagttc 720
Query: 520 ccattgttaacttgtttttttcttttcttttttctaaaaagatttatttattttatgtat 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccattgttaacttgtttttttcttttcttttttctaaaaagatttatttattttatgtat 780
Query: 580 atgagtacactgtagctgaacagatggttgtgagcct 616
|||||||||||||||||||||||||||||||||||||
Sbjct: 781 atgagtacactgtagctgaacagatggttgtgagcct 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1017
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1007
Effective search space: 610242
Effective search space used: 610242
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
