MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-507G11
Chromosome	9 (Build37)
Map Location	31,745,953 - 31,746,627
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Adamts8, Zbtb44, BC038156, St14, Aplp2, EG638580, EG666539, Prdm10, Nfrkb, Tmem45b, LOC666558, EG666576, Barx2, LOC100042266
Downstream gene	Tpi-rs4, LOC666619, LOC666622, Grit, Kcnj5, Kcnj1, Fli1, LOC669759, LOC100041398, Ets1, LOC100041426
Link	Open Mouse BAC browser

Click to get alignment info.

name	Adamts8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30806 MGI:1353468
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbtb44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235132 MGI:1925123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC038156 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270135 MGI:2652892
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	St14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19143 MGI:1338881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aplp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11804 MGI:88047
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG638580 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:638580 MGI:3644192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG666539 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666539 MGI:3644509
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs

name	Prdm10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382066 MGI:2682952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nfrkb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235134 MGI:2442410
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem45b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235135 MGI:2384574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 6 Proteins pseudo : _no_value

name	EG666576 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666576 MGI:3644929
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Barx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12023 MGI:109617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042266 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042266
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 37 mRNAs, 2432 ESTs, 66 Proteins pseudo : _no_value

name	Tpi-rs4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384926 MGI:98802
definition	gene_synonym : Tpi-4 note : triosephosphate isomerase related sequence 4 pseudo : _no_value

name	LOC666619 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666619
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC666622 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666622
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 721 ESTs pseudo : _no_value

name	Grit (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330914 MGI:2450166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnj5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16521 MGI:104755
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnj1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56379 MGI:1927248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fli1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14247 MGI:95554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669759 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669759
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100041398 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041398
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ets1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23871 MGI:95455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041426 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Adamts8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647242 GeneID:30806 MGI:1353468
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8 transcript_id : NM_013906.2

name	Zbtb44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606327 GeneID:235132 MGI:1925123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 44 transcript_id : NM_172765.2

name	BC038156 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343068 GeneID:270135 MGI:2652892
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC038156 transcript_id : NM_177768.2

name	St14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130245 GeneID:19143 MGI:1338881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppression of tumorigenicity 14 (colon carcinoma) transcript_id : NM_011176.4

name	Aplp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130287 GeneID:11804 MGI:88047
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amyloid beta (A4) precursor-like protein 2 transcript_id : NM_009691.2

name	EG638580 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386045 GeneID:638580 MGI:3644192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG638580 transcript_id : XM_984390.1

name	EG666539 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386047 GeneID:666539 MGI:3644509
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs product : predicted gene, EG666539 transcript_id : XM_984447.1

name	Prdm10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249098 GeneID:382066 MGI:2682952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PR domain containing 10 transcript_id : NM_001080817.1

name	Nfrkb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254248 GeneID:235134 MGI:2442410
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor related to kappa B binding protein transcript_id : NM_172766.2

name	Tmem45b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450348 GeneID:235135 MGI:2384574
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 45b transcript_id : NM_144936.1

name	Barx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7304916 GeneID:12023 MGI:109617
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BarH-like homeobox 2 transcript_id : NM_013800.1

name	Grit (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340796 GeneID:330914 MGI:2450166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase-activating protein transcript_id : NM_177379.2

name	Kcnj5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801261 GeneID:16521 MGI:104755
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 5 transcript_id : NM_010605.4

name	Kcnj1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543034 GeneID:56379 MGI:1927248
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium inwardly-rectifying channel, subfamily J, member 1 transcript_id : NM_019659.2

name	Fli1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370252 GeneID:14247 MGI:95554
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Friend leukemia integration 1 transcript_id : NM_008026.3

name	LOC669759 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259863 GeneID:669759
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical LOC669759 transcript_id : XM_001476302.1

name	Ets1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579951 GeneID:23871 MGI:95455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E26 avian leukemia oncogene 1, 5' domain transcript_id : NM_011808.2

name	Ets1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579949 GeneID:23871 MGI:95455
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E26 avian leukemia oncogene 1, 5' domain transcript_id : NM_001038642.1

name	LOC100041426 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259865 GeneID:100041426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100041426 transcript_id : XM_001476360.1

name	Adamts8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647243 CCDS:CCDS22946.1 GeneID:30806 MGI:1353468
definition	GO_component : GO:0031012 - extracellular matrix [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0008201 - heparin binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 8 protein_id : NP_038934.2

name	Zbtb44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606328 GeneID:235132 MGI:1925123
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : BTB (POZ) domain containing 15 protein_id : NP_766353.2

name	BC038156 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244274 GeneID:270135 MGI:2652892
definition	codon_start : 1 product : hypothetical protein LOC270135 protein_id : NP_808436.1

name	St14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7363445 CCDS:CCDS22948.1 GeneID:19143 MGI:1338881
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0019897 - extrinsic to plasma membrane [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IDA] GO_process : GO:0016477 - cell migration [Evidence TAS]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : matriptase/MT-SP1; protease, serine, 14 (epithin) product : suppression of tumorigenicity 14 (colon carcinoma) protein_id : NP_035306.2

name	Aplp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753094 GeneID:11804 MGI:88047
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0006878 - copper ion homeostasis [Evidence IMP]; GO:0009790 - embryonic development [Evidence IGI]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IGI]; GO:0030900 - forebrain development [Evidence IGI]; GO:0007626 - locomotory behavior [Evidence IGI]; GO:0007617 - mating behavior [Evidence IGI]; GO:0030901 - midbrain development [Evidence IGI]; GO:0050885 - regulation of balance [Evidence IGI]; GO:0001967 - suckling behavior [Evidence IGI] codon_start : 1 product : amyloid beta (A4) precursor-like protein 2 protein_id : NP_033821.1

name	EG638580 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386046 GeneID:638580 MGI:3644192
definition	codon_start : 1 product : similar to ZH1 protein protein_id : XP_989484.1

name	EG666539 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386048 GeneID:666539 MGI:3644509
definition	codon_start : 1 product : hypothetical protein protein_id : XP_989541.1

name	Prdm10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249099 GeneID:382066 MGI:2682952
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : PR domain containing 10 protein_id : NP_001074286.1

name	Nfrkb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254249 CCDS:CCDS22949.1 GeneID:235134 MGI:2442410
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 product : nuclear factor related to kappa B binding protein protein_id : NP_766354.2

name	Tmem45b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450349 CCDS:CCDS22950.1 GeneID:235135 MGI:2384574
definition	codon_start : 1 product : transmembrane protein 45b protein_id : NP_659185.1

name	Barx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304917 GeneID:12023 MGI:109617
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0042637 - catagen [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IDA]; GO:0045445 - myoblast differentiation [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : homeobox protein note : homeodomain transcription factor BARX2 product : BarH-like homeobox 2 protein_id : NP_038828.1

name	Grit (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893539 CCDS:CCDS22951.1 GeneID:330914 MGI:2450166
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0005938 - cell cortex [Evidence IDA] GO_function : GO:0005096 - GTPase activator activity [Evidence ISS] GO_process : GO:0007266 - Rho protein signal transduction [Evidence ISS] codon_start : 1 note : RhoGAP involved in the beta -catenin-N-cadherin and NMDA receptor signaling; GAB-associated CDC42; rac GTPase activating protein product : Rho GTPase-activating protein protein_id : NP_796353.1

name	Kcnj5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370254 CCDS:CCDS22952.1 GeneID:16521 MGI:104755
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium inwardly-rectifying channel J5 protein_id : NP_034735.3

name	Kcnj1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790201 CCDS:CCDS22953.1 GeneID:56379 MGI:1927248
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005242 - inward rectifier potassium channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : inwardly rectifying potassium channel ROMK-2 product : potassium inwardly-rectifying channel, subfamily J, member 1 protein_id : NP_062633.1

name	Fli1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679807 GeneID:14247 MGI:95554
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence TAS] GO_process : GO:0050875 - cellular physiological process [Evidence TAS]; GO:0008015 - circulation [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : Friend leukemia integration 1 protein_id : NP_032052.1

name	LOC669759 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259864 GeneID:669759
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476352.1

name	Ets1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579952 CCDS:CCDS22954.1 GeneID:23871 MGI:95455
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; avian erythroblastosis virus E26 oncogene 1; c-ets-1 protein product : E26 avian leukemia oncogene 1, 5' domain isoform 1 protein_id : NP_035938.2

name	Ets1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579950 GeneID:23871 MGI:95455
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2; avian erythroblastosis virus E26 oncogene 1; c-ets-1 protein product : E26 avian leukemia oncogene 1, 5' domain isoform 2 protein_id : NP_001033731.1

name	LOC100041426 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259866 GeneID:100041426
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476410.1

name	EG666576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666576
definition	number : 1 pseudo : _no_value

name	EG666576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666576
definition	number : 2 pseudo : _no_value

name	EG666576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666576
definition	number : 3 pseudo : _no_value

name	EG666576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666576
definition	number : 4 pseudo : _no_value

name	EG666576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666576
definition	number : 5 pseudo : _no_value

name	EG666576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666576
definition	number : 6 pseudo : _no_value

name	LOC666619 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666619
definition	number : 1 pseudo : _no_value

name	LOC100041398 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041398
definition	number : 1 pseudo : _no_value

name	LOC666558 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259890 GeneID:666558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 6 Proteins product : similar to hCG22524 pseudo : _no_value transcript_id : XR_033430.1

name	LOC100042266 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259891 GeneID:100042266
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 37 mRNAs, 2432 ESTs, 66 Proteins product : similar to Tubulin, alpha 1c pseudo : _no_value transcript_id : XR_033444.1

name	LOC666622 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259892 GeneID:666622
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 721 ESTs product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_033452.1

clone name	MSMg01-305H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064C04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-427J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528G24
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-017E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340F23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-507G11.T7 (MSMg01no507_g11.b1)	MSMg01-507G11.TJ (MSMg01no507_g11.g1)
ACC	AG581562	AG581563
length	1,419	744
length of high quality (start - end)	---	665 (80 - 744)
definition	CHROMAT_FILE: MSMg01no507_g11.b1 PHD_FILE: MSMg01no507_g11.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:35:56 2005	CHROMAT_FILE: MSMg01no507_g11.g1 PHD_FILE: MSMg01no507_g11.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:35:56 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TGTGTGCGTTTTTTGTGGGGGTNCTGCTCGTGGCAGGGAGAGAGCAGGAG AGAGTATTCTCCACAACATTCTAGTAAATTAAGTATAATNGTGTCGCGCG GGTACGTCTCCCGCCNCAACAAGAGTAGCTGCGGGCGGGCAGAAAAAGAC GAGCGCGGGACAAACGAGTGCTATGTAAAGACAGTGATCGAGCACGTGGT GCTGCGACAGGGGCGTGNCTTGATNGTGCGAACGTACGGTATACGCGTCT GTGAGCGATGCACTTGATCGAGGAAGCACCAGAGTGTGGGCTGCGAACTC GACGAGGCCGAGAGAGACAACATCAATCGCCAAGAATGAGAGAGCGACAG CCTGCTCTATGTCATTATATACACATATATATGATAAATGACGAAATACA TACGTTAGGAGGCTCGCGTTCGCGCGGAGTGGCGCTAATTTTTTAGTCTT GTAATTATCTTATATGTTAATCAATGATGTTTATCAAATGCTTTGTGAGG TGTGGGCATACGCCGTCAACGTAGTCACGTGCGCGTACGTCAGTGTTGTG TGTGTTGTATGATGAAGAGAAGGCGCCATGCATTACGCACCCGCCGTTCA TTTAAATCAGAACGATATTCTATACATATATAAATATACAAAATAATAGA GGCGTTTTGATATGTTATATGTTTCACTTCATGAGTCCTATTATAAATGA GCGTCATAGCGAGGAGATTACGCAGATAGCGCTGAACGCTCTATTCCACT ACAATATTATTGTGATTGCAAGCAGCGTATCGTCGTTACGTGCTCGTGAC CGCGTGGAGTATGGTGTCGCGTCCAGCAGCGCTGAAGACGGAATAGCTGA GGAATGAGATGTGCATCTCTCTGTGTGCGTGCGTGAACTGTACGACGTAG TGGAGCGTTTATGTGAGCCACGAACGATATAGCTCTTAGTCTCTCGTTGA TGTCCATAATGACGAATATACGCTACGAACAACGGCAATGTCTGCTGCTC TCACCTTACTTATTATTCAGCGCACACGTAGTGGTAGCACATGTGCGTAT AGGACGCCGAGACATCAGCAATACATGCTGATTACATTACGTTCTGCTAT GTGTATCTTCCTACTGCTCATATGTCAGTAGCATGCTTCACGCTCATAAT CTAGACATCGATTAATCATCACTCGCTAGTCTTGACTCACATCGCTACAG TGTGTGCCACATAGNGAGTGGTCGATAGTGAAGATGCTGTCAGCTCGTGT TTTCGCTACCGCATGCTATGCTCACACTCTATCAGTAGATATAATGTGCA TGAGTTAATATGATGTGACAGAGACGTTACCCAGTATCTAGTTACTATGA CGCGCGTGCACGAGGCATGATCGATCAGAGTACACGTACTACACGGAGAT AATCATTAGAGTACTCTCC	NNNNNCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCCCTGCCTCTCTTGCTCTC ACTTGTCAAATATATAAGACATTTCTCTCTAAAACTCACCCTTGTGGCCC ATGATTTTCACTCTTCAGATTCACAAGACAAGAATCCAAAAACCACCATC CTGGGACAGCTTTGGAGCCATCAAGTTTTCTAGGGCTCTAGTCACCCCCA CTCTCAACTAAACTCACTGAATTGATAAAAGGCTCTATTGATCTCAGTGA TACCCCAGTATTTTCCTGCTCCAATATTATTTCCCCAACAGGGAAATCCA AAGCAACATAAAAGAGCTAAATGATACATGTCATGAAAGTTCGTATCATT GGGTGACTCAGAAAGGAAACCATTGACAAATGTAGTCCATGACAGCTCTA GGATTCCTGCTCACCCGTTTCATACATGCTACTGCGATTGTTGTGAGACA TCTTTCCTGCGGTCAAATGATAAAGAGATTTTTACAGATACAGTCAAATC GTCACTCAGTTGGGTTTAAGCTAAGGACATAATCTTGGTCCTGCAAGGTT CTTTCTGAGTCAGATGGAGAGAGACAGTATGCCAAGGCAGAACGTTCAGA TAGGAGCTACCTTGGGTCTCTTTTATTTAGNTCTCTCGNTCTCCTCTCCT TTCCTCTCTTCCCATTCCATCCCCCTCTTTCTAGCATGCTGAAA
quality values	Open. Hide. 6 6 7 6 8 6 7 7 7 8 8 13 14 8 8 8 8 8 8 10 10 3 0 3 8 8 8 8 6 6 6 6 6 6 8 6 8 6 6 8 8 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 7 6 6 6 6 6 6 6 6 8 9 8 8 6 6 6 6 8 8 13 9 9 3 0 3 13 8 8 8 21 17 8 6 6 6 6 6 6 8 10 10 9 8 8 11 10 11 11 3 0 3 8 6 6 6 8 10 10 10 10 6 6 6 6 6 6 8 8 7 6 8 8 6 6 6 6 6 8 6 8 8 8 6 6 6 6 8 8 8 7 7 7 7 8 8 8 8 8 12 8 8 8 9 10 10 10 10 6 6 6 6 6 6 8 8 6 8 6 6 6 6 8 8 8 12 10 10 8 8 8 8 8 6 6 8 8 13 19 12 10 6 6 6 6 8 8 10 10 8 7 3 0 3 8 6 6 8 3 0 3 6 8 6 6 8 8 10 6 6 6 6 10 10 12 10 6 8 6 6 8 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 9 10 8 6 8 6 6 8 8 8 8 8 6 6 6 6 8 13 10 10 9 10 6 6 6 6 6 6 6 6 6 8 8 6 6 6 8 6 6 8 8 12 10 8 8 8 8 8 8 9 6 7 6 6 6 8 7 7 8 8 8 8 8 8 8 8 8 8 11 8 8 6 6 8 8 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 6 9 8 8 10 8 8 8 8 6 7 7 6 8 8 10 8 8 9 11 8 6 6 6 10 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 10 6 10 7 7 10 8 10 10 8 8 8 8 8 8 10 8 8 8 8 8 8 8 6 6 8 8 10 10 11 8 8 8 8 8 8 11 11 10 10 9 10 9 9 9 8 8 8 8 8 8 8 8 10 10 8 8 8 8 6 6 8 10 6 6 6 6 6 8 8 8 8 8 8 8 10 8 8 8 8 10 8 8 8 8 8 8 9 10 8 8 8 6 8 6 6 8 8 8 8 8 8 9 8 8 8 8 8 10 10 13 6 6 6 6 8 6 9 10 9 10 9 9 9 10 15 14 10 13 10 8 8 6 6 6 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 10 8 8 8 8 8 8 10 8 8 8 8 8 9 10 8 8 8 6 6 6 8 8 8 8 9 10 9 9 12 10 10 8 8 8 8 8 8 10 10 9 9 9 9 12 12 9 10 10 10 10 10 10 10 10 10 15 10 10 10 13 10 6 6 6 6 8 8 10 10 10 11 10 8 9 7 7 6 8 6 6 8 8 8 8 8 6 6 6 6 8 8 8 8 6 6 6 6 6 6 6 8 7 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 6 7 8 8 8 8 10 9 8 8 10 8 8 8 8 6 6 6 7 6 6 8 8 8 8 8 8 6 7 8 8 9 9 8 8 8 8 8 8 8 8 6 6 6 8 6 10 9 8 8 8 8 8 8 8 8 8 8 8 6 9 7 8 8 8 8 8 8 8 8 13 12 10 8 8 8 8 6 6 6 6 8 7 7 10 10 10 10 12 8 8 6 6 8 8 8 10 10 8 6 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 6 6 6 6 10 15 15 8 8 8 8 6 6 8 8 10 10 10 10 8 8 6 6 6 7 6 6 7 6 6 8 8 8 8 7 6 6 6 8 8 8 8 10 9 9 10 13 12 9 9 8 8 8 8 6 6 11 8 10 13 11 10 9 9 8 10 8 8 8 6 6 6 8 8 10 10 10 8 8 6 6 6 6 7 6 6 6 8 8 8 8 10 9 8 8 8 8 8 8 12 10 8 6 6 6 6 8 8 8 6 6 6 8 8 8 8 8 8 10 8 8 8 8 8 10 10 8 8 8 8 10 7 7 7 8 8 8 7 7 10 10 8 10 9 9 9 9 8 6 6 6 6 8 8 8 8 8 8 8 9 8 8 8 8 8 8 13 11 11 12 15 15 8 6 6 6 6 6 6 6 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13 8 8 8 8 8 8 6 6 6 8 8 8 7 8 8 10 8 8 8 8 8 8 9 8 8 6 6 6 6 8 8 9 10 10 10 10 10 8 8 6 6 8 8 12 10 9 8 10 10 10 8 8 8 10 9 10 10 8 8 8 8 8 8 8 10 8 13 10 10 10 10 10 10 10 13 10 11 12 24 18 12 11 9 8 8 8 6 6 6 6 8 8 10 10 15 10 10 8 10 10 8 8 7 9 9 8 8 6 6 8 8 10 9 8 8 9 9 9 8 10 9 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 13 11 8 9 8 6 8 6 6 8 6 6 8 6 8 8 8 8 8 10 10 10 10 10 10 8 8 8 8 8 8 8 8 10 10 9 11 10 9 10 8 10 8 10 8 8 3 0 3 6 6 6 10 6 6 8 6 6 8 6 8 8 8 8 8 8 6 6 8 6 8 8 10 8 8 6 6 8 8 6 6 6 6 7 8 9 10 9 9 8 10 10 8 10 8 8 6 7 8 8 8 8 8 10 8 8 8 8 8 9 9 9 10 10 10 10 10 8 8 8 8 8 10 8 9 10 11 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 11 10 15 15 15 10 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 10 9 9 9 10 10 10 10 10 10 11 10 10 10 10 6 6 6 6 8 8 6 6 8 7 6 10 8 10 10 8 8 8 8 8 8 10 10 10 10 6 10 7 7 10 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8	Open. Hide. 0 0 0 0 0 3 7 6 8 10 13 9 9 9 8 8 9 6 6 8 19 12 41 37 23 27 3 0 3 27 27 41 47 47 41 25 25 9 9 9 9 14 9 9 9 8 8 8 8 8 8 14 22 12 12 12 25 25 59 59 59 47 27 27 10 8 8 8 7 7 9 12 12 10 10 10 10 14 15 23 30 32 46 39 59 59 59 59 59 59 59 59 59 59 59 59 59 50 50 50 50 50 50 59 50 51 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 53 53 50 68 68 68 57 57 57 57 59 57 57 50 47 47 47 47 57 59 59 59 59 68 68 57 57 57 57 50 48 48 48 48 48 51 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 50 50 50 50 50 50 54 57 57 57 57 54 54 54 54 54 54 54 57 57 59 57 57 57 57 57 57 57 59 68 68 68 68 68 57 57 52 52 52 57 57 57 59 59 68 59 59 59 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 48 48 48 48 57 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 54 59 59 59 59 68 68 68 57 57 57 48 43 57 48 68 53 53 53 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 50 50 50 41 34 28 22 14 8 8 8 8 8 19 19 30 30 47 59 59 59 53 53 57 53 47 47 48 48 48 48 59 59 59 59 59 48 57 57 59 59 68 68 68 57 57 57 57 57 57 59 59 57 57 57 57 57 54 54 57 59 54 57 57 57 57 68 68 68 57 57 48 48 48 59 59 57 48 54 59 59 59 68 68 68 57 57 57 32 32 17 32 41 59 59 68 68 68 57 57 48 48 48 57 57 57 57 57 57 57 57 59 57 57 44 44 29 38 43 52 57 57 57 57 57 57 57 54 57 57 57 57 57 57 57 57 57 57 59 59 59 54 54 54 57 52 52 52 59 57 52 52 54 57 57 59 59 59 59 59 68 68 59 59 59 57 57 57 57 57 54 54 54 59 59 59 57 57 54 57 57 54 54 46 57 47 47 44 47 44 42 46 57 37 37 46 57 57 57 57 57 59 59 59 68 68 48 48 39 46 46 50 57 57 54 54 54 57 59 57 54 48 43 43 40 40 43 40 43 37 31 30 39 39 39 40 30 30 17 22 30 37 57 57 48 48 48 48 41 41 41 41 29 28 17 16 16 27 29 39 39 41 41 41 41 40 37 37 37 31 25 31 39 37 37 37 35 36 25 25 20 34 30 47 39 36 29 30 30 37 30 34 19 24 17 30 29 32 41 57 43 47 43 47 43 40 40 40 39 37 39 39 31 26 30 30 39 32 41 41 32 29 29 32 37 37 32 34 19 25 17 30 25 32 32 36 37 36 37 37 37 36 41 37 34 34 39 43 31 37 37 40 40 39 39 35 35 28 23 22 3 0 3 25 25 47 27 27 3 0 3 23 23 37 37 41 41 41 36 37 37 41 41 41 37 41 41 41 41 37 37 37 36 34 35 31 31 34 34 41 32 31 32 28 28 25 35 35 31 29 30 28 24 20 18 18 19 28 15 20 20 32 26 27 27

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no507_g11.g1 MSMg01no507_g11.g1 CHROMAT_FILE:
MSMg01no507_g11.g1 PHD_FILE: MSMg01no507_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:56 2005
         (665 letters)



>mm_chr9_31745763_31746827
          Length = 1065

 Score = 1120 bits (579), Expect = 0.0
 Identities = 646/675 (95%), Gaps = 10/675 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctccctgcctctcttgctctcacttgtcaaatatataagacatttctctctaaaactcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ctccctgcctctcttgctctcacttgtcaaatatataagacatttctctctaaaactcac 250

                                                                       
Query: 61  ccttgtggcccatgattttcactcttcagattcacaagacaagaatccaaaaaccaccat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ccttgtggcccatgattttcactcttcagattcacaagacaagaatccaaaaaccaccat 310

                                                                       
Query: 121 cctgggacagctttggagccatcaagttttctagggctctagtcacccccactctcaact 180
           | ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 311 cttgggacagctttggagccatcaagttttctagggctctagtcatctccactctcaact 370

                                                                       
Query: 181 aaactcactgaattgataaaaggctctattgatctcagtgataccccagtattttcctgc 240
           ||||||||||||||| |||||||| |||||||||||| |||||||||||||||| |||||
Sbjct: 371 aaactcactgaattggtaaaaggccctattgatctcaatgataccccagtatttccctgc 430

                                                                       
Query: 241 tccaatattatttccccaacagggaaatccaaagcaacataaaagagctaaatgatacat 300
           ||||||||||   ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 431 tccaatattaggcccccaacagggaaatccaaagcaacataaaagagctaaacgatacat 490

                                                                       
Query: 301 gtcatgaaagttcgtatcattgggtgactcagaaaggaaaccattgacaaatgtagtcca 360
           |||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtcatgaaagttcacatcaccgggtgactcagaaaggaaaccattgacaaatgtagtcca 550

                                                                       
Query: 361 t----------gacagctctaggattcctgctcacccgtttcatacatgctactgcgatt 410
           |          |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tagcgttccatgacagctctaggattcctgctcacccgtttcatacatgctactgcgatt 610

                                                                       
Query: 411 gttgtgagacatctttcctgcggtcaaatgataaagagatttttacagatacagtcaaat 470
           |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 611 gttgtgagacatctttcctgcggtcatatgataaagagatttttacagatacggtcaaat 670

                                                                       
Query: 471 cgtcactcagttgggtttaagctaaggacataatcttggtcctgcaaggttctttctgag 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cgtcactcagttgggtttaagctaaggacataatcttggtcctgcaaggttctttctgag 730

                                                                       
Query: 531 tcagatggagagagacagtatgccaaggcagaacgttcagataggagctaccttgggtct 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tcagatggagagagacagtatgccaaggcagaacgttcagataggagctaccttgggtct 790

                                                                       
Query: 591 cttttatttagntctctcgntctcctctcctttcctctcttcccattccatccccctctt 650
           ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cttttatttagttctctcgttctcctctcctttcctctcttcccattccatccccctctt 850

                          
Query: 651 tctagcatgctgaaa 665
           |||||||||||||||
Sbjct: 851 tctagcatgctgaaa 865


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space:   691025
Effective search space used:   691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information