MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-507O21
Chromosome	9 (Build37)
Map Location	52,303,519 - 52,304,046
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC640374, LOC668070, Arhgap20, LOC629554, LOC100043409, Fdx1, EG629557, Rdx, 9830163H01Rik, Zc3h12c, LOC100042876
Downstream gene	AI593442, Gm1715, Ddx10, Exph5, Kdelc2, 4930550C14Rik, Atm
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC640374 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:640374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 933 ESTs, 23 Proteins

name	LOC668070 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 811 ESTs, 5 Proteins pseudo : _no_value

name	Arhgap20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244867 MGI:2445175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629554 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043409 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043409
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Fdx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14148 MGI:103224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629557 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629557 MGI:3646966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 90 ESTs, 25 Proteins

name	Rdx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19684 MGI:97887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9830163H01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414109 MGI:3041213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zc3h12c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244871 MGI:3026959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 11 Proteins

name	LOC100042876 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	AI593442 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330941 MGI:2143099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gm1715 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382139 MGI:2686561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ddx10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77591 MGI:1924841
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 145 ESTs, 7 Proteins

name	Exph5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320051 MGI:2443248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kdelc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68304 MGI:1923765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930550C14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75311 MGI:1922561
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11920 MGI:107202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC640374 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259963 GeneID:640374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 933 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) transcript_id : XM_001480150.1

name	Arhgap20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47575839 GeneID:244867 MGI:2445175
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 20 transcript_id : NM_175535.3

name	LOC100043409 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259966 GeneID:100043409
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043409 transcript_id : XM_001480159.1

name	Fdx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679764 GeneID:14148 MGI:103224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ferredoxin 1 transcript_id : NM_007996.1

name	EG629557 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386106 GeneID:629557 MGI:3646966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 90 ESTs, 25 Proteins product : predicted gene, EG629557 transcript_id : XM_894456.2

name	Rdx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353663 GeneID:19684 MGI:97887
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : radixin transcript_id : NM_009041.2

name	9830163H01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47894414 GeneID:414109 MGI:3041213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9830163H01 gene transcript_id : NM_001001500.1

name	Zc3h12c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386107 GeneID:244871 MGI:3026959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 11 Proteins product : zinc finger CCCH type containing 12C transcript_id : XM_146893.6

name	LOC100042876 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259932 GeneID:100042876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Btf3 protein transcript_id : XM_001478980.1

name	AI593442 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342698 GeneID:330941 MGI:2143099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI593442 transcript_id : NM_177907.2

name	AI593442 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381639 GeneID:330941 MGI:2143099
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI593442 transcript_id : NM_178906.3

name	Gm1715 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259934 GeneID:382139 MGI:2686561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : gene model 1715, (NCBI) transcript_id : XM_001478987.1

name	Ddx10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386109 GeneID:77591 MGI:1924841
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 145 ESTs, 7 Proteins product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 transcript_id : XM_284494.5

name	Exph5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341147 GeneID:320051 MGI:2443248
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exophilin 5 transcript_id : NM_176846.2

name	Kdelc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55956900 GeneID:68304 MGI:1923765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : KDEL (Lys-Asp-Glu-Leu) containing 2 transcript_id : NM_212445.2

name	4930550C14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802091 GeneID:75311 MGI:1922561
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930550C14 gene transcript_id : NM_029247.2

name	Atm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680739 GeneID:11920 MGI:107202
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ataxia telangiectasia mutated homolog (human) transcript_id : NM_007499.1

name	LOC640374 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259964 GeneID:640374
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_001480200.1

name	Arhgap20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47575840 CCDS:CCDS23177.1 GeneID:244867 MGI:2445175
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Rho GTPase activating protein 20 protein_id : NP_780744.2

name	LOC100043409 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259967 GeneID:100043409
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480209.1

name	Fdx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679765 CCDS:CCDS23178.1 GeneID:14148 MGI:103224
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : adrenodoxin product : ferredoxin 1 protein_id : NP_032022.1

name	EG629557 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930042 GeneID:629557 MGI:3646966
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_899549.1

name	Rdx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677699 GeneID:19684 MGI:97887
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005902 - microvillus [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0045176 - apical protein localization [Evidence IMP]; GO:0051016 - barbed-end actin filament capping [Evidence IEA]; GO:0030033 - microvillus biogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation product : radixin protein_id : NP_033067.1

name	9830163H01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47894415 GeneID:414109 MGI:3041213
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC414109 protein_id : NP_001001500.1

name	Zc3h12c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386108 GeneID:244871 MGI:3026959
definition	codon_start : 1 product : similar to hCG39183 protein_id : XP_146893.6

name	LOC100042876 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259933 GeneID:100042876
definition	codon_start : 1 product : similar to Btf3 protein protein_id : XP_001479030.1

name	AI593442 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244544 GeneID:330941 MGI:2143099
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC330941 isoform 1 protein_id : NP_808575.1

name	AI593442 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725766 GeneID:330941 MGI:2143099
definition	codon_start : 1 exception : unclassified translation discrepancy note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC330941 isoform 2 protein_id : NP_849237.1

name	Gm1715 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259935 GeneID:382139 MGI:2686561
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479037.1

name	Ddx10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930055 GeneID:77591 MGI:1924841
definition	codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein_id : XP_284494.3

name	Exph5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28849901 CCDS:CCDS23181.1 GeneID:320051 MGI:2443248
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : synaptotagmin-like homologue lacking C2 domains b protein_id : NP_789816.1

name	Kdelc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47078285 CCDS:CCDS23182.1 GeneID:68304 MGI:1923765
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] codon_start : 1 product : KDEL (Lys-Asp-Glu-Leu) containing 2 protein protein_id : NP_997610.1

name	4930550C14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312924 CCDS:CCDS23183.1 GeneID:75311 MGI:1922561
definition	codon_start : 1 product : hypothetical protein LOC75311 protein_id : NP_083523.1

name	Atm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680740 GeneID:11920 MGI:107202
definition	GO_component : GO:0005634 - nucleus [Evidence TAS]; GO:0005819 - spindle [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016303 - phosphatidylinositol 3-kinase activity [Evidence ISS]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence TAS] [Evidence IDA]; GO:0047485 - protein N-terminus binding [Evidence ISS]; GO:0004674 - protein serine/threonine kinase activity [Evidence TAS] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IGI]; GO:0007049 - cell cycle [Evidence IEA]; GO:0000077 - DNA damage checkpoint [Evidence IMP]; GO:0008630 - DNA damage response, signal transduction resulting in induction of apoptosis [Evidence IMP]; GO:0006281 - DNA repair [Evidence IDA] [Evidence IMP]; GO:0007292 - female gamete generation [Evidence IMP]; GO:0007507 - heart development [Evidence IGI]; GO:0007094 - mitotic spindle checkpoint [Evidence ISS]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence TAS]; GO:0010212 - response to ionizing radiation [Evidence ISS]; GO:0001756 - somitogenesis [Evidence IGI] codon_start : 1 exception : mismatches in translation note : ataxia telangiectasia gene mutated in human beings product : ataxia telangiectasia mutated homolog protein_id : NP_031525.1

name	LOC668070 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259965 GeneID:668070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 811 ESTs, 5 Proteins product : similar to ribosomal protein L9 pseudo : _no_value transcript_id : XR_034563.1

name	LOC629554 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259931 GeneID:629554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC629554 transcript_id : XR_035395.1

clone name	MSMg01-437K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-155M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495J09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-125N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507M16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-083N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086C07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-507O21.T7 (MSMg01no507_o21.b1)	MSMg01-507O21.TJ (MSMg01no507_o21.g1)
ACC	AG581961	AG581962
length	776	1,772
length of high quality (start - end)	527 (53 - 579)	---
definition	CHROMAT_FILE: MSMg01no507_o21.b1 PHD_FILE: MSMg01no507_o21.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:36:38 2005	CHROMAT_FILE: MSMg01no507_o21.g1 PHD_FILE: MSMg01no507_o21.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:36:39 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNNNAATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGGAT CCGCGGAATTCTCTGGCTTGTCACGTTTTAATAAGAGCTCATCGGGTCCA GCTTTGTTAGAAAGTCAGGCTGTTGAATGTTCCTGGGAGCTTGGTGGTGC TGAGGGAGGAACCTGCTAGCTCAGCAGGTAGCTCAGGTGATGTGCAAAGA TGGGCGAACACAGCTCCTCCTTCTCAGGGGCATCAGAGAGAAAGCAGTGG AGAAAGGCTGAGGTAGTAGATTGACAGCTCTGAGTCCTCAGCTGGTAATT TAGAGTAAGAGAGAGGGGGCGCTAAAGAGCAAGATAGCATGAGAGCTGGA GAGAGCGAGAGCAAGAGGGAGAGAGAAAGAAGTATTTCTTGGCATCTAAA TATCAGGTCTTATTCTATTTGGTGGGGAATAAATCAGGAAAAGGCCATCA CAAAAGTATTTTTAAATACCCAAGAAGACACAAAAAGTAAAGAAAACAGC CTAAAAAGAGATACCCCCAAATAGCATTTATAGCTGAGTCTTGGAGTCTG GGTACAGTTTAAAGTTTGTTCTCTATGTATGTTTTTCATCTGATATATTC TCAAATTACAGTGTAAGTTCAGTTGAAGGGGAGAGGGTCTTTCATTTGGA TAATAAAACAGATGGTTAAGTGCCTTGGAAACCAAGTCCCATGGCTTCAC AACTCACTAGCTGCGTGGCCTTAAGCAAGTTCCATGCCCGCTTGGGACAT GAGGATATTATTTATTTAGCTCACTC	ATGATGGCGTCTATGATGCGAGAGGTGGAGTCGCGAGAGATGGAGCGGGT GAGTGCATATGTGTATGTTCTCCTCCTCTCNACTGGCGCGTGTGAGTGGT GCCGATGCCTTTGTAGCTCTCGCTCTTTGAATTCAATCTACACGTTTCTC CTGTCCTTGTGTTGCCTGCCTGCACTATGTCTAGTAAGACTTCCTGAGCT AATATAACAAGAGGGGAGATTGATGTAAGATGAAATGTGTAGGAGGTGTG AATATGATAAGATACTGACTATTAGCAAAGTGCAGGAAGNTGCGTCTGTC ATGCATTTCCTATGTACATCACTGCGCCACGCTCCTACGTGTCTCCTCCC CTCGCTGCTCTGCACCCCGCCTCACCGAGCAGATACATGGTGCATCTAGA TACATGGTCGACTCGTTCNGNGTCTGCTCCGTAGTCGGCGCTACGTGTGG CGTCGTGCTCTTCACACTCTTACTCGAATACCACACACACCTGCGACAAT TCTAATACTGTGTTCATGCTCCATGATGGCTAAGGTGCTGCNGTTGTGCG GTGCGACGCATGGCGCAGCTGCTGTCGCGAGACGCTGAATAGATGCTCAA TGCCGAGACTGAGCTCTCGCGTGGGACTGACGGAGCGTGTGCCGGGTGTA TGGAGTGATAGTAGAGCAGCACGACTTGTTACAGTGTTGTGTGGCGTGTG ATGGTGCGTGGTGTCGGGNTGCTGGAACTGTCACGATGCTGGCAGTGGAG CACTCCGCAGACTGGAGTGTGAGCGATATCTAGTGACGAGCACAAGCACG CTCTCTCGCTATGGTGCCGCTCGCGATGATGATGAGCATGCAGGTCANGG AATTCGGACCAGAGTACATCTACTGCAGAGTATATGTGACTTCATAGTGC TATGATATCTCGGTATCCGGGCTGTGTGCGGCGCTCGTGAGAGACCTGTA TCATGCGAGCACTGATGTCATTGTATATCTGATGACACAGGTAGAGCGAC TAGTGTGCAGAGAGAGTGCGGTGACGACATGAGTAGGCGCTATGGATCCT ATGAGCTGACTCTACGCTTGACGNTGTGATTGNCGACTGCTGTCGTGTGT ACCCGGGCGCGCATAATAGTACGCTATATGATTAGTATATCACGCACGCT ACCCGATATGCAGACGTATATAGAATGGCTGAGCGCATCTCTCGACGTCA TGCGATATCACGATAGATCCTCGGACTAGCTATTCGACTCTTTGTGAGAC GCGCCTATATTCGATCAGCACACTATGCANCACTGTACTCTCTCCTGCCC ATTGCTCCTGTATNCACGCGACGTTTGAGAGTCGACTATATCATACTTGT CATCACTTCGTAGCTATTACACTGTGTTGTTGACATCGTGTACGGCGTCG TAGTGTTCGTCGTATGACTCCTGTTAGCTTCGTGTGTAAGATCGCATGTG CGCGCGCTGATGCATATACGCGGCACAGTGCANGCAAGCGTGTATTGTGT ACAGATGTATCTATGACAAATACGTGCGTCAGTACGACTGTTATGACTGT ATACACTCGTCGATATACGCCATGTCTGCTCCACCGCCGACTCTCGNTGT GCTGATTGCTGGCACTGTGCTTTGGNAGAGNTGAGATCATTCATGGTATA TGAGACTATCATCCATTCATCATCTCAACTCACGCAATGTTTACACGTCA NGNATGAGTCGCACACTGGTGTGAACGCTATANTATAATACTCGTCGTTT CGACGNCGCTGTCGTCGCGCTG
quality values	Open. Hide. 0 0 0 0 3 6 6 8 10 8 8 8 8 8 19 25 39 39 32 25 25 30 30 37 37 37 40 37 44 44 59 29 25 22 22 17 22 23 15 9 9 9 9 19 12 11 9 10 10 11 14 21 25 25 23 30 30 31 33 36 33 59 50 50 47 47 27 27 11 11 11 9 9 9 9 12 20 28 37 36 39 39 48 48 48 57 57 53 53 50 50 43 43 57 57 57 42 42 37 37 37 42 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 68 68 68 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 51 68 68 68 51 51 50 50 68 68 68 68 68 68 59 59 57 57 52 59 59 68 68 68 68 68 59 59 57 57 52 59 57 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 59 59 59 57 57 57 52 57 57 68 68 59 59 57 57 52 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 52 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 43 28 18 14 14 16 16 16 16 14 21 27 32 43 57 57 59 57 57 57 59 57 57 68 68 59 59 57 57 57 59 59 57 54 54 54 59 54 54 54 57 57 57 57 59 59 59 59 59 59 57 57 57 54 54 57 57 57 57 57 57 57 57 46 48 47 47 48 47 48 59 59 59 48 47 39 35 35 39 42 39 48 48 54 54 54 59 59 59 59 59 59 59 48 48 47 32 30 23 23 23 23 23 28 32 28 30 28 30 37 37 44 44 34 30 25 30 30 37 37 41 41 41 48 48 48 59 57 57 57 57 57 57 57 48 48 48 57 59 57 43 43 43 43 43 44 59 57 57 48 48 48 48 48 48 59 59 59 59 57 57 59 59 59 59 59 57 54 54 54 54 54 48 48 48 48 59 59 59 59 54 54 54 54 54 54 50 43 43 30 30 30 43 43 57 57 48 48 48 59 48 48 48 48 48 48 37 37 30 30 28 32 34 35 32 32 41 37 37 37 37 37 36 34 39 37 30 30 25 28 28 39 39 30 30 14 14 12 25 11 11 11 22 22 30 31 21 28 14 14 13 25 13 14 14 30 28 30 17 17 17 22 19 19 12 12 12 24 24 28 28 23 23 14 14 14 22 22 22 23 16 16 13 22 21 30 30 37 32 22 17 15 10 10 12 11 18 20 20 20 20 33 21 13 13 13 17 17 15 15 15 17 16 21 12 12 12 21 21 20 15 18 16 15 15 14 15 21 24 13 13 11 11 11 10 9 9 9 9 13 14 15 15 12 12 13 16 15 9 9 10 10 8 8 9 12 12 19 19 15 22 13 14 11 16 11 11 11 12 11 11 12 17 17 24 24 15 17 12 20 11 11 11 20 12 11 11 11 11 11 11 11 15 13 10 10 10 9 10 10 21 17 15 16 11 11 8 11 8 8 8 8 10 10 10 15 12 18 14 14 14 15 15 10 9 9 9 10 9 8 8 8 6 8 7 11 11 11 10 10 21 22 17 10 10 10 10 10	Open. Hide. 6 6 6 6 6 6 6 8 10 10 10 11 11 11 8 8 8 8 8 8 8 10 6 6 8 6 6 8 6 6 6 6 6 6 6 6 8 8 8 6 6 8 8 11 11 11 8 8 6 6 6 6 8 10 10 10 11 9 8 8 8 8 8 8 10 9 9 8 8 8 6 7 6 7 6 10 11 8 8 3 0 3 8 8 10 10 8 8 8 8 6 6 6 6 6 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 10 6 6 6 6 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 9 8 8 13 10 10 10 10 8 8 8 8 8 8 8 8 10 8 8 9 8 8 8 10 8 8 10 11 13 10 10 8 6 6 6 6 6 8 10 10 10 10 10 8 8 8 8 8 10 10 12 14 14 10 10 6 6 6 6 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 9 9 9 10 10 10 11 10 12 8 8 8 8 8 9 9 8 8 6 7 8 6 6 6 6 8 9 8 8 8 8 8 8 8 8 13 8 8 10 11 10 10 11 16 10 8 8 8 8 8 9 15 13 12 10 9 9 8 8 8 10 10 10 8 8 6 6 6 8 13 10 10 10 10 10 9 9 9 10 3 0 3 8 8 9 9 8 8 7 7 8 8 8 8 7 6 8 8 10 11 11 11 10 10 8 9 8 8 7 7 8 7 6 6 6 6 6 8 8 6 7 7 6 8 8 8 10 10 10 10 10 9 9 10 10 10 9 9 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 6 6 8 6 6 6 10 6 8 8 8 8 7 6 8 8 6 6 8 6 6 6 6 8 8 13 10 10 13 10 7 7 6 8 6 8 6 6 8 8 8 6 7 7 7 8 8 10 10 10 10 6 6 8 3 0 3 0 3 8 8 8 12 10 8 8 8 8 7 10 6 6 6 6 6 6 6 6 8 8 10 9 9 9 11 8 8 6 6 6 8 8 8 8 13 10 11 10 10 9 7 7 7 6 6 6 6 12 12 9 10 10 10 8 10 8 8 8 6 6 7 6 8 6 6 8 10 9 9 6 8 6 6 8 6 8 8 8 10 8 8 8 8 6 6 6 6 8 6 6 10 6 6 8 10 8 8 8 8 6 6 8 6 9 10 10 8 8 8 6 6 7 7 6 6 8 8 3 0 3 9 10 10 10 8 8 8 6 6 8 8 7 7 9 9 10 10 10 8 6 6 6 6 8 8 12 11 11 11 13 8 8 6 6 6 6 6 6 6 7 6 8 8 6 6 6 8 6 6 6 6 6 8 8 6 6 6 6 6 8 6 6 8 6 6 8 10 6 6 10 10 19 13 12 9 9 9 9 8 8 8 8 6 6 6 6 8 8 8 7 6 6 6 9 10 9 9 9 9 8 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 7 10 9 7 8 6 8 8 10 8 8 10 6 6 6 6 9 7 8 10 10 8 8 8 8 9 10 11 12 10 8 8 8 8 8 8 10 10 10 8 8 6 8 8 8 8 10 10 10 8 8 6 6 3 0 3 6 9 8 10 10 8 8 8 8 9 10 13 9 8 7 6 8 6 6 6 6 6 6 6 8 6 6 6 6 6 6 9 9 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 11 11 11 10 8 6 6 7 8 6 8 8 10 8 8 8 7 6 6 6 6 6 8 8 14 11 9 9 9 12 12 10 10 6 6 6 6 6 8 9 9 9 11 9 10 10 9 8 8 8 8 8 8 8 8 10 8 8 8 6 8 6 6 6 8 12 11 11 3 0 3 6 6 6 6 6 6 6 6 6 6 6 6 6 6 8 6 6 6 6 6 6 6 6 6 6 8 6 8 6 6 6 8 6 6 6 8 13 13 16 10 9 9 9 9 9 11 11 11 10 9 8 8 8 8 11 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 8 6 6 8 8 7 7 7 8 8 8 11 10 6 6 6 6 10 13 16 12 9 9 9 9 9 10 10 10 9 9 6 6 8 8 8 8 8 8 6 6 6 6 6 6 8 6 10 8 7 7 7 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 8 9 8 8 8 8 6 6 8 8 6 8 6 6 10 6 8 8 8 8 8 8 8 10 8 8 8 8 6 6 6 6 6 6 6 6 6 6 8 6 6 7 10 12 13 13 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 6 8 6 6 6 6 6 8 8 10 9 9 11 11 13 10 9 3 0 3 11 11 10 6 8 7 3 0 3 6 8 8 8 8 8 8 8 6 8 6 6 8 6 7 6 7 6 6 6 8 8 8 9 6 6 6 6 6 6 8 6 6 6 6 6 6 6 6 6 8 8 8 8 8 10 10 9 6 6 6 6 6 8 8 8 7 7 6 10 6 6 6 8 8 8 8 6 6 6 6 6 6 8 8 8 7 7 6 8 8 10 10 9 10 8 8 8 8 8 8 8 11 8 8 8 8 8 8 8 8 7 7 7 11 10 10 8 10 8 8 8 6 6 6 6 6 6 6 6 6 10 13 11 11 10 10 10 6 6 7 7 7 7 8 6 10 10 8 8 8 8 10 9 6 6 6 6 6 7 8 8 8 6 6 6 6 12 8 8 6 7 7 8 8 8 8 8 8 8 8 6 7 8 8 10 8 8 6 6 6 6 8 6 6 6 6 8 8 8 8 8 8 8 3 0 3 7 7 6 6 6 6 8 8 10 10 10 11 11 11 8 8 6 6 6 6 6 8 8 10 11 8 8 8 8 10 10 3 0 3 6 8 6 10 8 8 6 6 6 6 7 7 8 8 7 8 7 7 7 9 10 10 8 7 9 7 6 6 8 8 8 7 6 6 6 8 8 8 8 8 8 8 8 8 8 10 10 8 6 6 6 6 6 8 8 8 8 8 10 6 6 6 8 8 8 8 8 8 11 8 10 8 8 8 8 7 7 7 6 6 6 6 6 8 6 6 6 6 8 7 8 8 8 8 8 8 11 8 6 6 6 6 6 6 7 11 10 9 9 10 8 8 8 6 6 6 6 6 6 6 6 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 13 11 9 9 8 8 8 8 10 10 8 8 9 14 10 10 6 6 6 6 8 8 8 11 8 10 11 10 10 10 3 0 3 8 8 6 6 8 8 12 12 12 11 11 9 8 8 8 8 8 10 10 11 10 11 14 12 10 9 8 8 8 8 8 6 6 6 6 6 6 8 8 8 8 8 10 6 6 6 6 10 10 13 8 8 6 6 6 6 6 8 10 6 6 6 6 8 8 8 7 8 7 9 9 9 11 10 8 8 8 8 8 9 9 9 8 8 6 6 6 8 10 11 10 8 8 8 8 8 8 11 8 8 8 8 6 6 6 6 6 6 7 8 9 3 0 3 8 10 10 8 8 8 6 8 6 6 6 6 8 8 8 6 8 6 7 6 6 8 8 9 9 9 3 0 3 7 7 3 0 3 6 6 6 7 7 7 6 8 6 10 10 10 7 8 8 7 6 8 6 6 7 7 10 8 8 8 8 8 8 7 7 6 6 8 6 6 6 8 6 6 10 8 8 8 6 7 6 6 6 6 8 8 6 6 6 6 6 6 6 6 6 6 6 8 6 6 7 3 0 3 0 3 6 6 6 6 6 6 6 6 6 6 6 8 8 8 7 6 6 6 8 8 6 6 6 6 8 7 6 3 0 3 6 8 8 8 8 10 8 10 6 6 6 6 6 6 6 6 8 8 8 8 3 0 3 8 7 7 7 7 7 11 10 8 8 7 7 7 7 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no507_o21.b1 MSMg01no507_o21.b1 CHROMAT_FILE:
MSMg01no507_o21.b1 PHD_FILE: MSMg01no507_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:38 2005
         (527 letters)



>mm_chr9_52303320_52304246
          Length = 927

 Score =  932 bits (482), Expect = 0.0
 Identities = 515/528 (97%), Gaps = 4/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattctctggcttgtcacgttttaataagagctcatcgggtccagctttgttagaaagt 63
           |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 200 gaattctccggcttgtcatgttttaataagagctcatcgggtccagctttgttggaaagt 259

                                                                       
Query: 64  caggctgttgaatgttcctgggagcttggtggtgctgagggaggaacctgctagctcagc 123
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 260 caggctgttgaatgttcctgggagcttggtggtgttgagggaggaacctgctagcccagc 319

                                                                       
Query: 124 aggtagctcaggtgatgtgcaaagatgggcgaacacagctcctccttctcaggggcatca 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggtagctcaggtgatgtgcaaagatgggcgaacacagctcctccttctcaggggcatca 379

                                                                       
Query: 184 gagagaaagcagtggagaaaggctgaggtagtagattgacagctctgagtcctcagctgg 243
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagagaaaacagtggagaaaggctgaggtagtagattgacagctctgagtcctcagctgg 439

                                                                       
Query: 244 taatttagagtaagagagagggggcgctaaagagcaagatagcatgagagctggagagag 303
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 440 taatttagagtaagagagagggggcgctaaagagcaagagagcatgagagctggagagag 499

                                                                       
Query: 304 cgagagcaagagggagagagaaagaa----gtatttcttggcatctaaatatcaggtctt 359
           ||||||||||||||||||||||||||    |||||| |||||||||||||||||||||||
Sbjct: 500 cgagagcaagagggagagagaaagaacgaagtattttttggcatctaaatatcaggtctt 559

                                                                       
Query: 360 attctatttggtggggaataaatcaggaaaaggccatcacaaaagtatttttaaataccc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attctatttggtggggaataaatcaggaaaaggccatcacaaaagtatttttaaataccc 619

                                                                       
Query: 420 aagaagacacaaaaagtaaagaaaacagcctaaaaagagatacccccaaatagcatttat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagaagacacaaaaagtaaagaaaacagcctaaaaagagatacccccaaatagcatttat 679

                                                           
Query: 480 agctgagtcttggagtctgggtacagtttaaagtttgttctctatgta 527
           ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 680 agctgagtcttggagtctgggtacaatttaaagtttgttctctatgta 727


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space:   474089
Effective search space used:   474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information