Query= MSMg01no508_g03.b1 MSMg01no508_g03.b1 CHROMAT_FILE:
MSMg01no508_g03.b1 PHD_FILE: MSMg01no508_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:16 2005
(673 letters)
>mm_chr9_95906056_95907128
Length = 1073
Score = 1278 bits (661), Expect = 0.0
Identities = 667/669 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtgttttgcacttagagaatttatttattgagacagatcctggggtgggggca 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtgtttggtacttagagaatttatttattgagacagatcctggggtgggggca 264
Query: 65 gtggtgtcttaactatacagatctcaaacataaccaagtagtacttaatgaaaacctgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtggtgtcttaactatacagatctcaaacataaccaagtagtacttaatgaaaacctgtg 324
Query: 125 tttctataattgacctctttatttttatatttaaagaaatactctataaagtacaaccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttctataattgacctctttatttttatatttaaagaaatactctataaagtacaaccca 384
Query: 185 ggatatgtgttggccggtcgccttggcgtgagtggataccttgtttcaaggtttacagga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggatatgtgttggccggtcgccttggcgtgagtggataccttgtttcaaggtttacagga 444
Query: 245 agtatttttattggaagaggatctaggagaaagtaagtttgtgttagggatatttgctta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtatttttattggaagaggatctaggagaaagtaagtttgtgttagggatatttgctta 504
Query: 305 aagtggcagaaaaattaaatgatagagattaaatgcttactatctcggtattgatttttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagtggcagaaaaattaaatgatagagattaaatgcttactatctcggtattgatttttt 564
Query: 365 tccaattaatgactgtggactaagttgcccatgaattcctccagcagtagttctttccat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccaattaatgactgtggactaagttgcccatgaattcctccagcagtagttctttccat 624
Query: 425 gaacagcatagtttttagatgttttcaaagacagtttgtattttagcagctaaccttgaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaacagcatagtttttagatgttttcaaagacagtttgtattttagcagctaaccttgaa 684
Query: 485 aaaaggtatcagagggtgtgtgtgagcctcagtaatatatttctgagttttgttaatttt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaaggtatcagagggtgtgtgtgagcctcagtaatatatttctgagttttgttaatttt 744
Query: 545 cttttttctaataacataatttatttatatgctttcttaacttggattttaaagcctgtc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttttttctaataacataatttatttatatgctttcttaacttggattttaaagcctgtc 804
Query: 605 ctataatttttaattactgctaattagaagtaaccatgtagactaaaatgtagaacaatc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctataatttttaattactgctaattagaagtaaccatgtagactaaaatgtagaacaatc 864
Query: 665 agaactgag 673
|||||||||
Sbjct: 865 agaactgag 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_g03.g1 MSMg01no508_g03.g1 CHROMAT_FILE:
MSMg01no508_g03.g1 PHD_FILE: MSMg01no508_g03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:16 2005
(345 letters)
>mm_chr9_96056764_96057508
Length = 745
Score = 630 bits (326), Expect = 0.0
Identities = 338/342 (98%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 1 ctatgtagatagaccaggatggccttgaactcagagagatccacctacctctgtcttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ctatgtagatagaccaggatggccttgaactcagagagatccacctacctctgtcttcca 453
Query: 61 agtgctggatttaaaggtatggaccactacgcctggctgctactaacagttcttatccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agtgctggatttaaaggtatggaccactacgcctggctgctactaacagttcttatccct 393
Query: 121 ttatctctgtattttgcttgtagcctagctattcctatacattctggttttctatatatt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttgtctctgtattttgcttgtagcctagctattcctatacattctggttttctatatatt 333
Query: 181 caaatttacctttctacccttcttcctttgaagactagatcttactatataggtcatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caaatttacctttctacccttcttcctttgaagactagatcttactatataggtcatgct 273
Query: 241 ggtctt-tatctgttttgcaactcaggagaattcaaactctacttcccaagtgctaggat 299
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggtcttgaacctgttttgcaactcaggagaattcaaactctacttcccaagtgctaggat 213
Query: 300 taaaagtgtgtatgtctatagcttattccctccctccctccc 341
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 taaaagtgtgtatgtctatagcttattccctccctccctccc 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
