NNAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAATCC
GCGGAATTCTCTACATGTTCCATCCTTTCATCTCAGCTCCAAACTTTGTC
TCTGTAACTCCTTCCAAGGGTGTTTTGTTCCCACTTCTAAGGAGGGGCAT
AGTGTCCACACTTCAGTCTTCATTTTTCTTGAGTTTCATGTGTTTAGGAA
ATTGTATCTTATATCTTGGGTATCCTAGGTTTTGGGCTAATATCCACTTA
TCAGTGAGTACATATTGTATGAGTTCCTTTGTGAATGTGTTACCTCACTC
AGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAATTC
ATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTT
TCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTG
GCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTT
ACCAGTTGGGGCATCTTGTGGATATATGCCCAGGAGAGGTATTGCTGGAT
CCTCCGGTAGTACTATGTCCAATTTCCTGAGGAACCGCCAGACTGATTTC
CAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCC
TCTTTCTCACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTT
AGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGGTGTTTTGGATTGCA
TTTCCCTGATGAT

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTATCTCTTCCCAAACATCAAAA
CTTATTGTATGACACTGAAACTTGGAATACATTCTAAAGTACTCTGTCAT
TCAAATATTCATTATCAAGTATTAATCATCTACATTAAGGGGCTCAAAGT
ACAATTCAACATGCATGTCCAATATGTATACCCACCAATTTAGGTGAGAA
CAATTTTTCTACCATTTATTCTTTAAGCCTTTGAAGTACTCTCTTGTACT
TCTCCACAAAATGCATACAGAGCTATTGTTTATAAAAAAAAGATAAAATT
TGAATGTTTCTTACTTTATAGCCCAGGCTGGCCTAGATCTCACCATGTGG
CCCAAGCTAGCTTTTATGCATGGAAATATTCCTCCATCAGCATCTTAGGT
GCTAACAGTATAAGTCACCATGCATGGTAATTATTATTAGCACCCCTCTG
TATTGCAAAATATCAGAATTCCTTATCTGTGCAAATGTTTCTGTATTAGT
ATTCAACTTTCCCTTATACTTCCTTAAAAAAATCCATGTCCCATCTCTTT
TACACAACCAACATCCCGTATCTTCAATTGCCCAATATGCCTGCAAAAAT
CTATTTCTATGGGTGTCCTTATGCCTAGCCTTTGCTATTGCCATATCCCT
AAAGTAAGCAGACAGTTCCTCTCTTCTCTGATTGNCATTCATTCCTGAAC
ATCTTTTCTGGCCTGGG

Query= MSMg01no508_i10.g1 MSMg01no508_i10.g1 CHROMAT_FILE:
MSMg01no508_i10.g1 PHD_FILE: MSMg01no508_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:27 2005
         (583 letters)



>mm_chr9_6107456_6108440
          Length = 985

 Score =  886 bits (458), Expect = 0.0
 Identities = 477/484 (98%), Gaps = 2/484 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attatctcttcccaaacatcaaaacttattgtatgacactgaaacttggaatacattcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 attatctcttcccaaacatcaaaacttattgtatgacactgaaacttggaatacattcta 425

                                                                       
Query: 61  aagtactctgtcattcaaatattcattatcaagtattaatcatctacattaaggggctca 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aagtactctgtcatccaaatattcattatcaagtattaatcatctacattaaggggctca 365

                                                                       
Query: 121 aagtacaattcaacatgcatgtccaatatgtatacccaccaatttaggtgagaacaattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagtacaattcaacatgcatgtccaatatgtatacccaccaatttaggtgagaacaattt 305

                                                                       
Query: 181 ttctaccatttattctttaagcctttgaagtactctcttgtacttctccacaaaatgcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttctaccatttattctttaagcctttgaagtactctcttgtacttctccacaaaatgcat 245

                                                                       
Query: 241 acagagctattgtttataaaaaaaa--gataaaatttgaatgtttcttactttatagccc 298
           |||||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 244 acagagctattgttaaaaaaaaaaaaagataaaatttgaatgtttcttactttatagccc 185

                                                                       
Query: 299 aggctggcctagatctcaccatgtggcccaagctagcttttatgcatggaaatattcctc 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aggctggcctagatctcaccatgtggcccaagctagcttttatgcatggaaatattcctc 125

                                                                       
Query: 359 catcagcatcttaggtgctaacagtataagtcaccatgcatggtaattattattagcacc 418
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 124 catcagcatcttaggtgctaacagtataagtcaccatgcatggtaattattattagcaac 65

                                                                       
Query: 419 cctctgtattgcaaaatatcagaattccttatctgtgcaaatgtttctgtattagtattc 478
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 64  cctctgtattgcaaaatatcagaattccttatctgtgcaaatgtttctatattagtattc 5

               
Query: 479 aact 482
           ||||
Sbjct: 4   aact 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 985
Length adjustment: 10
Effective length of query: 573
Effective length of database: 975
Effective search space:   558675
Effective search space used:   558675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)