NAATATNNNNNNNNNNNNNNCCNCCCCCCCCCCCCCNNNCNNNNNNNNNC
CCCCCCCCCCCCCCCCCCCCCNNNNNNNNCCNNNNNNCCNNNNNNNCCCC
NCCCCCNNNNCCCCCCCCCCCCCNCCCCCCCCCCCNNNNNNCCCCCCCCC
CCCCCCCCCCCCCCNNCCCCCCCCCCCCCCCCCCCCCCACCCNNCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCNCNNNNNCCCCCCCCCCNCCCCCCCCC
CCCCCCAACCCCCCCCCCCCCAAACCCCCCTTCCCTCCCCCCCCCCNCTN
CCCCCCCAACCCCNNCCCCNNCCCCCCCCCCNCCCCNCCCCCCCNCCNNN
CCCCCCCCCCCCCCACACCCCCCTCCCCCNTCCCCCCCCCCCCCCCTTCC
NCCCCCCCCCCCCCCCCCCCCCTCCCCCCACTCTCCCTCCCCCCCCCCCC
TTTCCNCCCCCCCTCTCCCCCCCCCCCCCTTCTCCACATTACCCTCTCCA
TCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCC
CCNCCTCCCCCCCTCCCCCCACACCTCCACCCCACTCCCTCCCTCCCTTA
TACATCCCCCCATTNCCCCACTCACCCATCTACACCCCCCCCCCACCCAC
CCTCAAACTAACACCCCCCCCCCATCACCA

NNNGGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGTCCTCTAGAAGAGCAGCCA
GTGTTTTAACCATGAATCCCATTTCTAGCCTCCTTACTGCTGAAATAATA
AAGAAACATATTTTTTCTTGGGGGGGGGGGTTCTCCAGCTTTTTTCTATA
GAATTACTTGGATGTATACTCTAACTTCTAGATCATTCTTAATGGGGTGT
CATCTTTATACATTTTTAATCATTATTTTCTTTTAATAAATGTTCCAACT
TTGATAAAATGGACAGACACTTCCTCTTGATTGGTTTTTATGCTTTCCTC
ATTCCTTCCTCCTTTTCGAATTTGGCTTTGGCTCCCATAGAACACTCTTC
TAAGAAAACATAACAGTCTCAACTCTTTGTCCCTCTGTCTCTCTCTGTCT
CTCTGTCTCTGTCTCTCTGTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCT
GTCTCTGTCTCTCTTTCTGTCTGTCTGTCTCTCTCTCTCTCTCTTCTCAC
ACACACACACACACACACACACACACACACATACACACACACTTCAATAG
GCTTTACTTTGCTGGAAAGAGAGATTTACTGATTTTCTATTTTACCCTTT
ACTGGGAATGAGGCAGATGAAAAACAGCTATAACACAAACAATAAAAGCC
TAGTGTGAAAAAAATATACCCCTTTACTTTAATGGTATTTTAGGTAT

Query= MSMg01no508_k01.g1 MSMg01no508_k01.g1 CHROMAT_FILE:
MSMg01no508_k01.g1 PHD_FILE: MSMg01no508_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:35 2005
         (589 letters)



>mm_chr9_10123191_10124175
          Length = 985

 Score =  951 bits (492), Expect = 0.0
 Identities = 567/600 (94%), Gaps = 19/600 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagtcctctagaagagcagccagtgttttaaccatgaatcccatttctagcctccttact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtcctctagaagagcagccagtgttttaaccatgaatcccatttctagcctccttact 260

                                                                       
Query: 61  gctgaaataataaagaaacatattttttcttgggggggggggttctccagcttttttcta 120
           |||||||||||||||||||  |||||||||||||||||| |  |||||||||||||||||
Sbjct: 261 gctgaaataataaagaaac--attttttcttggggggggtg--tctccagcttttttcta 316

                                                                       
Query: 121 tagaattacttggatgtatactctaacttctagatcattcttaatggggtgtcatcttta 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 317 tagaattacttggatgtatactctaacttctagatcatttttaatggggtgtcatcttta 376

                                                                       
Query: 181 tacatttttaatcattattttcttttaataaatgttccaactttgataaaatggacagac 240
           ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 377 tacatttttaatcattattttatttaaataaatgttccaactttgataaaatggacagac 436

                                                                       
Query: 241 acttcctcttgattggtttttatgctttcctcattccttcctccttttcgaatttggctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acttcctcttgattggtttttatgctttcctcattccttcctccttttcgaatttggctt 496

                                                                       
Query: 301 tggctcccatagaacactcttctaagaaaacataacagtctcaactctttgtccctctgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tggctcccatagaacactcttctaagaaaacataacagtctcaactctttgtccctctgt 556

                                                                       
Query: 361 ctctctctgtctctctgtctctgtctctct--gtctctgtctctctctgtctctctctgt 418
           ||||||||||||||||||||||||||||||  ||||||||||||||||  |||| |||||
Sbjct: 557 ctctctctgtctctctgtctctgtctctctctgtctctgtctctctct--ctctttctgt 614

                                                                       
Query: 419 ctctgtctctgtctctctttctgtctgtctgtctctctctctctctctt-------ctca 471
           ||  |||||| ||||||| ||| ||| ||| |||||||||||||||||        | ||
Sbjct: 615 ct--gtctctctctctctctctctctctctctctctctctctctctctcacacacacaca 672

                                                                       
Query: 472 cacacacacacacacacacacacacacacacatacacacacac--ttcaataggctttac 529
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 673 cacacacacacacacacacacacacacacacatacacacacacacttcaataggctttac 732

                                                                       
Query: 530 tttgctggaaagagagatttactgattttctattttaccctttactgggaatgaggcaga 589
           ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 733 tttgctggaaagagagatttactgattttctattttaccctttactaagaatgaggcaga 792


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 84
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 985
Length adjustment: 10
Effective length of query: 579
Effective length of database: 975
Effective search space:   564525
Effective search space used:   564525
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)