Query= MSMg01no511_e14.b1 MSMg01no511_e14.b1 CHROMAT_FILE:
MSMg01no511_e14.b1 PHD_FILE: MSMg01no511_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:06 2005
(522 letters)
>mm_chr9_75333802_75334723
Length = 922
Score = 812 bits (420), Expect = 0.0
Identities = 450/460 (97%)
Strand = Plus / Minus
Query: 63 ggtcccagtctgagctttcccattgccttgtgtgctaacctaaaaccttaccgtactctt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 ggtcccagtctgagctttcccattgccttgtgtgctaacctaaaaccttaccgtactctt 863
Query: 123 ttaaaacaaccagcttattgattccgctgcgctactctttcctatctgttagggactcaa 182
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 862 ttaaaacaaccagcttattgattccactgcgctactctttcctatctgttagggactcaa 803
Query: 183 tcactgtgtcctccccaaatccgcatgctgtagccccagtacgcaggggtggtgggattt 242
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 802 tcactgtgtcctccccaaatccacatgctgtagccccagtacgcaggggtggtgggattt 743
Query: 243 aaagacgggcctttggaaggcagatcgagagagagaatgcacacacataaagcccttgtg 302
||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 742 aaagatgtgcctttggaaggcagattgagagagagaatgcacacacataaagcccttgtg 683
Query: 303 attccacatacccactttatttgtctcagtcttattcaccagttacatttgtcttggttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 attccacatacccactttatttgtctcagtcttattcaccagttacatttgtcttggttt 623
Query: 363 tgtttgaagcctgaacaggcctttgtggcactgtgtatttctctgtcctctgaagtcaag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgtttgaagcctgaacaggcctttgtggcactgtgtatttctctgtcctctgaagtcaag 563
Query: 423 tattaaagttcttctcgtactaacatatcaaaacactcgaaatgttttataagcggaaaa 482
||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||
Sbjct: 562 tattaaagttcttctcgtactaacatatcaaaacacttgaaatgttctataagtggaaaa 503
Query: 483 gcaattaattctctgacatttaaataacaaatattacccg 522
|||||||||| ||||||||||||||||||| |||||||||
Sbjct: 502 gcaattaattttctgacatttaaataacaagtattacccg 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_e14.g1 MSMg01no511_e14.g1 CHROMAT_FILE:
MSMg01no511_e14.g1 PHD_FILE: MSMg01no511_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:07 2005
(434 letters)
>mm_chr9_75160090_75160923
Length = 834
Score = 783 bits (405), Expect = 0.0
Identities = 423/429 (98%), Gaps = 2/429 (0%)
Strand = Plus / Plus
Query: 1 cctggaacttgcattactaagaattgtgagccaccacatggtgctgggaataaaattgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctggaacttgcattactaagaattgtgagccaccacatggtgctgggaataaaattgag 260
Query: 61 tcctctggaagaacatcgagtgtttttaactgctgagccattaccacaaccctttgctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctctggaagaacatcgagtgtttttaactgctgagccattaccacaaccctttgctct 320
Query: 121 ctatgtgtgtacactttataagcacacacacgtatacttatgtagtctgttttatccatg 180
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 321 ctatgtgtgtacactttataagcacacacacatacacttatgtagtctgttttatccatg 380
Query: 181 taataatcgagcataagcttattgtttccataagctaatgttctgctaaattctgaggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taataatcgagcataagcttattgtttccataagctaatgttctgctaaattctgaggat 440
Query: 241 aaaacaatggataaatgctgggcatggcagtgca-catgtttaatcccagcactcaagaa 299
|||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||
Sbjct: 441 aaaacaatggataaatgctgggcatggcagtg-agcatgtttaatcccagcacttaagaa 499
Query: 300 gcagaggcaggttgagcaacatgacttctgggccagcctgctctacaaagggtgttacag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcagaggcaggttgagcaacatgacttctgggccagcctgctctacaaagggtgttacag 559
Query: 360 ggaagccagggctataaagagggagacaaatatagataaatggggggcggggggttgtac 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggaagccaggactataaagagggagacaaatatagataaatggggggcggggggttgtac 619
Query: 420 acagagaga 428
|||||||||
Sbjct: 620 acagagaga 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
