Query= MSMg01no513_h09.b1 MSMg01no513_h09.b1 CHROMAT_FILE:
MSMg01no513_h09.b1 PHD_FILE: MSMg01no513_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:58 2005
(695 letters)
>mm_chr9_58438642_58439736
Length = 1095
Score = 714 bits (369), Expect = 0.0
Identities = 372/373 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcttctgaatttcctgagggaattttctacaatttcagtctaaactcttaaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttctgaatttcctgagggaattttctacaatttcagtctaaactcttaaca 263
Query: 64 aacacaggagtccttctccaaggttgtctttccaccttgaacacttacagtgactacttg 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacacaggagtccctctccaaggttgtctttccaccttgaacacttacagtgactacttg 323
Query: 124 acaagcagtccttttatctttgagcaactttgttaggaaggtctccttaatggagttccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acaagcagtccttttatctttgagcaactttgttaggaaggtctccttaatggagttccc 383
Query: 184 tcccagtaacttctgtccttgggcccagctttgttcgccaagggagtgttggaaggatag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcccagtaacttctgtccttgggcccagctttgttcgccaagggagtgttggaaggatag 443
Query: 244 gtgaaccttccatcttcctctgctacttctctttgctgatgtcatttctaggactcatta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgaaccttccatcttcctctgctacttctctttgctgatgtcatttctaggactcatta 503
Query: 304 aacatattgtctccacagcttatgaaatccaagctataaagtaacaaactcatttttaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aacatattgtctccacagcttatgaaatccaagctataaagtaacaaactcatttttaat 563
Query: 364 tttgtataatttt 376
|||||||||||||
Sbjct: 564 tttgtataatttt 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_h09.g1 MSMg01no513_h09.g1 CHROMAT_FILE:
MSMg01no513_h09.g1 PHD_FILE: MSMg01no513_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:58 2005
(621 letters)
>mm_chr9_58580649_58581669
Length = 1021
Score = 1116 bits (577), Expect = 0.0
Identities = 607/621 (97%), Gaps = 7/621 (1%)
Strand = Plus / Minus
Query: 1 agaaggcatttgtaaggatgtactgtgttctccatgtgcccctcaaagattgttgtgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 agaaggcatttgtaaggatgtactgtgttctccatgtgcccctcaaagattgttgtgctg 921
Query: 61 gtgggtgaacctggtgtctgatgtgttggaggtgaagtgcatgctaatgaggccatgcca 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 gtgagtgaacctggtgtctgatgtgttggaggtgaagtgcatgctaatgaggccatgcca 861
Query: 121 tcaccaccacactcagaagagattagtggtggtctcacgtcgtgggttatctcagaaaaa 180
||||||||||| ||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 860 tcaccaccacaatcagaagagattaatggtggtctcac-------attatctcagaaaaa 808
Query: 181 ctaaaggtcgtcaccctgtgtaactggtgccttatatactcagccatatttcctttttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ctaaaggtcgtcaccctgtgtaactggtgccttatatactcagccatatttcctttttgt 748
Query: 241 gttagaatattgccaagcaagcctccagacctactgagagctacttaatcttagacactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gttagaatattgccaagcaagcctccagacctactgagagctacttaatcttagacactg 688
Query: 301 agcctccaaaaccatgagctaaatgagcctgtttataaagtgccagtctgaggaatttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agcctccaaaaccatgagctaaatgagcctgtttataaagtgccagtctgaggaatttca 628
Query: 361 ttatgtcaacagaaaatggattagtggaagtaataaaattaactgttgcttagtgtgtaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttatgtcaacagaaaatggattagtggaagtaataaaattaactgttgcttagtgtgtaa 568
Query: 421 atactgcatgtccaaccctggcatgggatctggctgatgtctcataaagttttactgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atactgcatgtccaaccctggcatgggatctggctgatgtctcataaagttttactgaat 508
Query: 481 ggtgaatgaaagccaagcattctgctgacatctgacctcgcactgtcatttaatctttgg 540
|||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 507 ggtgaatgaaagccaagcattctgctgacatctgaccttgcactgtcatttgatctttga 448
Query: 541 aaattctataagcacggcttcttaagccttttctactcccaaccctgtgtgcctaagtaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaattctataagcacggcttcttaagccttttctactcccaaccctgtgtgcctaagtaa 388
Query: 601 tttttatgccactttggatgt 621
|||||||||||||||||||||
Sbjct: 387 tttttatgccactttggatgt 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
