CTATCCTTTTATTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCTCAGCTACCTTTCCAGTACCAAGTCTGCCTGC
ATGCTGCCATGCTTCCCACCATTATGGCAATAGACTAAACCTCTGAACGG
AAAGCCAGCCCCAATTAAATGTTTTCCTCTAAGAGTAGCTGTGGTCATGG
TGTCTCTTCACAGCAATAACACCCTAAGTCATAGCTATAATAAAACAAGT
GTTTGCATGTTCACAGGGAGTTGTTACTGTCTCCATTTTACACTTGAACA
ACCTTAAACAATGAAAACTCACTCCGTGCCCCAAAACTTACAATCCCGGG
TTGGAAAAGCCCCCAAATCTAACACCTTCCGGGTGTAAAAAACCCCCAGT
CCTTCCCCCGGAGGGAACTAATTTTTGGCCTCCCTTCCCCGGGAGAGGGG
GAAATTTTTGCCCAAAAATTTTTTGTTTTTCCCCCCGGGTGGTTTTTTCC
CCCCCCAAAAAATCACACCCCTCCCCCGGGAGGTTATACCCCGGGTGTTG
CCCCACCCCCCCTTTGAAAAAAAAATTTCTCCCCCCCTTCTCCCCCCCGG
GGGAGGGGGAAAAAAAAAAAACACCCCCCGTGTTATTGGGGGGGGGGGGG
GGGCCTCTCCCCCAAGATTTTCCTCCAAAAAAAAAAAGGGTGGGGGAGAA
AAACTCCCCCCGCCCG

NCCCCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGTTCCATTTATACAACTT
TCTTATTACGTTAGGATAAACTCATGAATTAGAGTGCAAGTCTATGTGAT
TTTTTAAAACTTTCTTTCTTTCATGAATTGAGAAAGGAAAAATATTTAAT
TTCATTTTGGATTTTAAACTCTTTCTCTCCACATTTCCCATCTTCTGTTC
TTCAAGTTGTTCTGTTTCTATTCCAGACTCCAGTCATGAGAGCATCCTCC
CAACTCACATAAAATTTCACATGCCTACTGTACCCCTAAATATAAGAAAA
GCTCAGACAACCCCACAATTTGAAGAAAAAAGCTTGTGTGTGTGTGACTG
AGAGTGTGTGTGTGTGTGACTGAGTGTGTGTGTGTGTGACTGAGAGTGTG
TGTGTGTGTGACTGAGTGTGTGTGTGTGACTGAGAGTGTGTGTGTGTGTG
ACTGAGAGTGTGTGTGTGTATGACTGAGTGTGTGTGTGACTGAAAGTGTG
TGTGTGTGTGTGTGTGCGTGCGTGTGACTGAAAGTGTGTCCATTCATGCA
GATGAAGATAACTACACCTTATTATGGTAGAAAAATATAACACAGCAAGT
GGAATAAGAGCCTCAAGATGAGCAAGAACAAACCAGAACGAACCAGAATG
AACAGCATGAATACGTGGAATTTTATTAGGCAATGTGGCAAGGACCCTTA
AGTTCCAGATCTGAAGCTCACCCTGGA

Query= MSMg01no515_m18.g1 MSMg01no515_m18.g1 CHROMAT_FILE:
MSMg01no515_m18.g1 PHD_FILE: MSMg01no515_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:47:16 2005
         (634 letters)



>mm_chr9_104466041_104467074
          Length = 1034

 Score =  944 bits (488), Expect = 0.0
 Identities = 507/516 (98%), Gaps = 6/516 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgttccatttatacaactttcttattacgttaggataaactcatgaattagagtgcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tgtgttccatttatacaactttcttattacgttaggataaactcatgaattagagtgcaa 64

                                                                       
Query: 61  gtctatgtgattttttaaaactttctttctttcatgaattgagaaaggaaaaatatttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  gtctatgtgattttttaaaactttctttctttcatgaattgagaaaggaaaaatatttaa 124

                                                                       
Query: 121 tttcattttggattttaaactctttctctccacatttcccatcttctgttcttcaagttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tttcattttggattttaaactctttctctccacatttcccatcttctgttcttcaagttg 184

                                                                       
Query: 181 ttctgtttctattccagactccagtcatgagagcatcctcccaactcacataaaatttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttctgtttctattccagactccagtcatgagagcatcctcccaactcacataaaatttca 244

                                                                       
Query: 241 catgcctactgtacccctaaatataagaaaagctcagacaaccccacaatttgaagaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 catgcctactgtacccctaaatataagaaaagctcagacaaccccacaatttgaagaaaa 304

                                                                       
Query: 301 aagcttgtgtgtgtgtgactgagagtgtgtgtgtgtgtgactgagtgtgtgtgtgtgtga 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 305 aagcttgtgtgtgtgtgactgagagtgtgtgtgtgtgtgactgagagtgtgtgtgtgtga 364

                                                                       
Query: 361 ctgagagtgtgtgtgtgtgtgactgag----tgtgtgtgtgtgactgagagtgtgtgtgt 416
           |||||||||||||||||||||||||||    |||||||||||||||||||||||||||||
Sbjct: 365 ctgagagtgtgtgtgtgtgtgactgagagtgtgtgtgtgtgtgactgagagtgtgtgtgt 424

                                                                       
Query: 417 gtgtgactgagagtgtgtgtgtgtatgactgagtgtgtgtgtgactgaaagtgtgtgtgt 476
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 425 gtgtgactgagagtgtgtgtgtgtatgactgagtgtgtgtgtgactgagagtgtgtgtgt 484

                                               
Query: 477 gtgtgtgtgtg--cgtgcgtgtgactgaaagtgtgt 510
           |||||||||||  ||||||||||||||| |||||||
Sbjct: 485 gtgtgtgtgtgtgcgtgcgtgtgactgagagtgtgt 520



 Score =  300 bits (155), Expect = 2e-85
 Identities = 164/167 (98%)
 Strand = Plus / Plus

                                                                       
Query: 468 tgtgtgtgtgtgtgtgtgtgcgtgcgtgtgactgaaagtgtgtccattcatgcagatgaa 527
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 668 tgtgtgtgtgtgtgtgtgtgcgtgcgtgtgactgagagtgtgtccattcatgcagatgaa 727

                                                                       
Query: 528 gataactacaccttattatggtagaaaaatataacacagcaagtggaataagagcctcaa 587
           |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gataactataccttattgtggtagaaaaatataacacagcaagtggaataagagcctcaa 787

                                                          
Query: 588 gatgagcaagaacaaaccagaacgaaccagaatgaacagcatgaata 634
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gatgagcaagaacaaaccagaacgaaccagaatgaacagcatgaata 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 237
Number of extensions: 40
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 2
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)