Query= MSMg01no519_i06.b1 MSMg01no519_i06.b1 CHROMAT_FILE:
MSMg01no519_i06.b1 PHD_FILE: MSMg01no519_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:15 2005
(677 letters)
>mm_chr9_73948748_73949824
Length = 1077
Score = 1272 bits (658), Expect = 0.0
Identities = 670/674 (99%), Gaps = 1/674 (0%)
Strand = Plus / Plus
Query: 5 gaattctaccttcaataaaaggagaaaatgaaaataa-aaagatgcatcctgagagtgca 63
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 204 gaattctaccttcaataaaaggagaaaatgaaaataacaaagatgcatcctgagagtgca 263
Query: 64 tgaaagtgatattgttctgctatattttggttggatacttgaaagaaacctcagctaatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaaagtgatattgttctgctatattttggttggatacttgaaagaaacctcagctaatg 323
Query: 124 tctgctttaatttagcatttctttcacttttcctggtatcaagtaggcttttggatgtat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctgctttaatttagcatttctttcacttttcctggtatcaagtaggcttttggatgtat 383
Query: 184 tatcctgagttaaatggctgtcaatttcctattttcactttaaaaattggatgttgatgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatcctgagttaaatggctgtcaatttcctattttcactttaaaaattggatgttgatgt 443
Query: 244 taatattaaatattaaagtttaatttaatgttgaaaattaatatataacatataatttag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taatattaaatattaaagtttaatttaatgttgaaaattaatatataacatataatttag 503
Query: 304 tgttcaaattgataataccaatgtcagtgataccaatgtttaatagttaacatttggtgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgttcaaattgataataccaatgtcagtgataccaatgtttaatagttaacatttggtgt 563
Query: 364 ttaatttctaatgatttcctttgtttataatcagatattttgcaacagtagacactgtgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttaatttctaatgatttcctttgtttataatcagatattttgcaacagtagacactgtgc 623
Query: 424 tatttgttggaaatacaactgagtgtgactaaatttatgtttacaatctcttgagctact 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatttgttggaaatacaactgagtgtgactaaatttatgtttacaatctcttgagctact 683
Query: 484 tccagttttagctctgactccatgctccccattgatgccctgtgactcaggttttccata 543
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttagttttagctctgactccatgctccccattgatgccctgtgactcaggttttccata 743
Query: 544 gcagcagcaggtagctaccaaactgcatgttagttgttcattattttaaatgccaactct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcagcagcaggtagctaccaaactgcatgttagttgttcattattttaaatgccaactct 803
Query: 604 tttatgtccttgagttcaggggtagactggggtcagtaaagtaggtctcctgtgctgtgg 663
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 804 tttatgtccttgagttcaggggtagactggggtcagtaaggtaggtctcctgtgctgtgg 863
Query: 664 ctttgcttggattg 677
||||||||||||||
Sbjct: 864 ctttgcttggattg 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_i06.g1 MSMg01no519_i06.g1 CHROMAT_FILE:
MSMg01no519_i06.g1 PHD_FILE: MSMg01no519_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:15 2005
(633 letters)
>mm_chr9_74123198_74124229
Length = 1032
Score = 1199 bits (620), Expect = 0.0
Identities = 629/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 1 ttgatgaaagaggaaaagataacagccccacactgtgacctcctggggggggggtgttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ttgatgaaagaggaaaagataacagccccacactgtgacctcctggggggggggtgttaa 772
Query: 61 tttgagagtgcagctgctaagagccagcagcttccagtgtcctcccccacaccctctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tttgagagtgcagctgctaagagccagcagcttccagtgtcctcccccacaccctctcaa 712
Query: 121 ggaccccaaagctgtgtcaaatttatcattttatacttgactatgtttaaatggcttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ggaccccaaagctgtgtcaaatttatcattttatacttgactatgtttaaatggcttcca 652
Query: 181 cctgcactctccgactcttccaagacacatctgtcaagaatgtcctctgtatcttggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cctgcactctccgactcttccaagacacatctgtcaagaatgtcctctgtatcttggaag 592
Query: 241 tttgccgagttcaagtcgttgccatgcttgaccggactgactgaagctgttaaaaagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tttgccgagttcaagtcgttgccatgcttgaccggactgactgaagctgttaaaaagaga 532
Query: 301 gaaaggagagagaaagagaaagacagccatgaaaaagtagcagtgagcatcattagacca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 531 gaaaggagagagaaagagaaagacagccatgaaaaagtagcagtgagcatca-tagacca 473
Query: 361 gttcagacccacagatagtgcggggcacactatggaaacacaaataataaattgaaataa 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gttcagacccacagatagtgtggggcacactatggaaacacaaataataaattgaaataa 413
Query: 421 agtgtaccctctaagtatttattggcagacacgtaattagttgaaaaatccatagatgtg 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 412 agtgtaccctctaagtatttattggcagacatgtaattagttgaaaaatccatagatgtg 353
Query: 481 actttatctcagaagaaaaataagcttctggctttggcttaaaagctacatagctacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 actttatctcagaagaaaaataagcttctggctttggcttaaaagctacatagctacaaa 293
Query: 541 gtgacaaagtgatgctttcgaagtagaaatcgtatttttaatgcataaatctaaaacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtgacaaagtgatgctttcgaagtagaaatcgtatttttaatgcataaatctaaaacaat 233
Query: 601 atagtcaattaagagcacatgggcacagagca 632
||||||||||||||||||||||||||||||||
Sbjct: 232 atagtcaattaagagcacatgggcacagagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
