Query= MSMg01no519_n02.b1 MSMg01no519_n02.b1 CHROMAT_FILE:
MSMg01no519_n02.b1 PHD_FILE: MSMg01no519_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:39 2005
(687 letters)
>mm_chr9_68976578_68977664
Length = 1087
Score = 1230 bits (636), Expect = 0.0
Identities = 672/684 (98%), Gaps = 1/684 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctgtgatgacaacctcaagcggcccctcttgtaaaacatgctgtaagcaaaa 64
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 205 gaattctcctgtgatgacaacctcaagcagcccctcttgtaaaacatgctgtaagtaaaa 264
Query: 65 ccagccccctttcttatctctcccctgctgaacctgctactgcttcaccatctgtttcct 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 ccagccccctttcttatctctcccccgctgaacctgctactgcttcaccatctgtttcct 324
Query: 125 ggaatgcaacccctcaacactcagaaatccttacagcccaaggtcctgatggagactgga 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 325 ggaatgcaacccctcaacactcagaaatccttacagccccaggtcctgatggagaatgga 384
Query: 185 aactaaataatgagccaagtaaggaggtaaactgaggctctcagcggtgtgaatatagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aactaaataatgagccaagtaaggaggtaaactgaggctctcagcggtgtgaatatagaa 444
Query: 245 ctactaaacctgactacatctctggaacaagttagtctaagggtcaggctaggagaccaa 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctactaaacctgactacttctctggaacaagttagtctaagggtcaggctaggagaccaa 504
Query: 305 ttatggtatctgagttttctttccattgctgtgaatttagggagtaagaggtttatttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttatggtatctgagttttctttccattgctgtgaatttagggagtaagaggtttatttca 564
Query: 365 gtgtacagtcccagcctgtcattgaagagaaggcaaggcagaaacttcaaacaaccaatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 565 gtgtacagtcccagcctgtcattgaagagaaggcaaggcagaaacttcaaacagccaatc 624
Query: 425 acatgacatccatgattaagagcagagagtactgaatggcatgcatgcctacgtgctcgt 484
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 625 acatgacatccatgattaagagcagggagtactgaatggcatgcatgcctacgtgcttgt 684
Query: 485 gctcaacagaattcccccattctcatacatttcagaaccccc-tgcctagggaatagtgc 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 685 gctcaacagaattcccccattctcatacatttcagaacccccctgcctagggaatagtgc 744
Query: 544 cgccaatactggcctaagacttcccacataagcaatctaataagctagactctcacaaac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cgccaatactggcctaagacttcccacataagcaatctaataagctagactctcacaaac 804
Query: 604 atgccgtaggccaacccaatatagacaatcactcattaagactgtcttcccatgttgcac 663
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atgtcgtaggccaacccaatatagacaatcactcattaagactgtcttcccatgttgcac 864
Query: 664 caagttgacaattaaagcttagca 687
||||||||||||||| ||||||||
Sbjct: 865 caagttgacaattaacgcttagca 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_n02.g1 MSMg01no519_n02.g1 CHROMAT_FILE:
MSMg01no519_n02.g1 PHD_FILE: MSMg01no519_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:39 2005
(662 letters)
>mm_chr9_69008147_69009208
Length = 1062
Score = 841 bits (435), Expect = 0.0
Identities = 438/439 (99%)
Strand = Plus / Minus
Query: 224 caattactcagccagcagctttgattgccatttcctaccagcctctaggtcagtacttct 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 caattactcagccagcagctttgattgccatttcctaccagcctctaggtcagtacttct 1003
Query: 284 caaagtctgaggctcaggtgacccgttccaagatcttgctataactgtgagctccgactc 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 caaagtctgaggctcaggtgacccgttccaagatcttgctataactgtgagctccgactc 943
Query: 344 aggtctaggggaggcactgattctgtacgtctaaggttccagaggaagctgagacttcca 403
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 aggtctaggggaggcgctgattctgtacgtctaaggttccagaggaagctgagacttcca 883
Query: 404 gtccatgggttcaattttgaacaagattctagaccaagagcactttacattgctctcatc 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 gtccatgggttcaattttgaacaagattctagaccaagagcactttacattgctctcatc 823
Query: 464 agagggagaagtggcccacagacagtcacggcaaggcaagcatagcagcttttcttgact 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 agagggagaagtggcccacagacagtcacggcaaggcaagcatagcagcttttcttgact 763
Query: 524 tgatttctcttcgggaaccatctcccttctctctcttctgggtgcacttgcagttactaa 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tgatttctcttcgggaaccatctcccttctctctcttctgggtgcacttgcagttactaa 703
Query: 584 cctacagggggcactctgttgcaccggctcagtatacatgcatgggtttgaatttcagca 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 cctacagggggcactctgttgcaccggctcagtatacatgcatgggtttgaatttcagca 643
Query: 644 gtgtcactctgactgctgg 662
|||||||||||||||||||
Sbjct: 642 gtgtcactctgactgctgg 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
