ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAACTTCAAAGGCCAGAGGTCCAACTATGCCTTGAAAATCTTACAGTT
CACCAGGAATGGGTTTCGGCAGGTAAGCCCACCTATGCTGCCAAAGTGTT
GGATACCCCCTCTTTGCCCTTTTCTCTGTCTCTGCTTCCAGTGGCCTCCA
GATGTCAAGTATCTCCCCAAATAGCAGCCTGCATCCATTCTGATCTAGGC
TCCTGGACTGCAGTCGCCACCTCTTTTCTGGGTCCCACATCAGCCCGCAT
GGGCTCTTCTAGTTGTATACCTTGCAGAGGGAGGAGACAAGGGGGTGTCA
CTTAGAAAGGAGTGCCTGGGTCCTCTACACTCTCTGATTGTTCTTTTTCT
GGGAGCAACGGAAAGTGTCAGGGGACTTCCTCCAAGCCTGGAACCCCCCC
CCTGGACTCCAGGGGTACCACCGCTAAGGCAAAGGGTGGATCCCGTGTGG
GGTAGGATGGCTCTTTGTGTTGGGATAGCCTGCCCCTTCTCCTGCTCTTC
TCTAGCCCACCCCTCCCATGCTCCCCTGTCTTCAGCTCTCTGTTTCCATA
ATCTCAGGGACACTATGCCCTTCAGAGTCCTTTGGTTTTCTGTACGGTTC
TTCCTTTTCCATTAAACCCTCTTGTTCCCCTCTCCGGTCTTCTACCAGAG
GATACAGACTCTGACAACCACTCC

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAACAGGGCTGGAACCTGTAGGCAGGGCCT
GATGCTGAGGCTATGGAGGAGTCCTATTTACTGGCTTGCTCCTCATTGCT
TCCTAGGACAGCTTTCTTCTAGACTACAAGACCACCAGCCCAGGGGGTGA
CACTGTGCCCAGTAGACTCGACCCTCCCCATCAACCACAAATTTTTAAAA
CTGCCCCACAGGCCTGCAGACAGCCAGATCTAACAGAGCCAATTTCTCAG
TTGAGGTTCCCTCTTCTCAGATGACTATGGCTTGTGTCAAGCTGACATAA
AACTAACCAGCAGAGACAACTTGTAAAGGAAAGTGTTTATTTAGGCTTAT
AGTTTCAGAGGGTTAGAGTCCGTGATTGCCATTCATGTTGGGGAGCATGG
GAGCAAGCAAGCAGGCATGGTGCTGGAACAGTGGCTGAAAGCTCACCTCT
TAGTCCATAAACAGGAAGGGAAGGGAGAGGTGGGAATTGGGGTGAGTCTT
TTGAAACCTCAGGGCTAATCCCCAGTGACACACCTTCTCCAACATGGGCA
CACTTTCTAATCCTTCCCAAACAGTTCCACCAATGAGGGGCTAAGGATTA
AAATACATGAGACTATGGAGCCCATCCTCGTTCATACCACCACAAGGGGG
TAGAGAGAAGATAATTN

Query= MSMg01no519_p07.b1 MSMg01no519_p07.b1 CHROMAT_FILE:
MSMg01no519_p07.b1 PHD_FILE: MSMg01no519_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:50 2005
         (654 letters)



>mm_chr9_42429365_42430416
          Length = 1052

 Score = 1139 bits (589), Expect = 0.0
 Identities = 635/651 (97%), Gaps = 4/651 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaacttcaaaggccagaggtccaactatgccttgaaaatcttacagttcaccagg 64
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 gaattcaacagcaaaggccagaggtccaactatgccttgaaaatcttacagttcaccagg 793

                                                                       
Query: 65  aatgggtttcggcaggtaagcccacctatgctgccaaagtgttggataccccctctttgc 124
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 aatgggtttcagcaggtaagcccacctatgctgccaaagtgttggataccccctctttgc 733

                                                                       
Query: 125 ccttttctctgtctctgcttccagtggcctccagatgtcaagtatctccccaaatagcag 184
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ccttttctctttctctgcttccagtggcctccagatgtcaagtatctccccaaatagcag 673

                                                                       
Query: 185 cctgcatccattctgatctaggctcctggactgcagtcgccacctcttttctgggtccca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cctgcatccattctgatctaggctcctggactgcagtcgccacctcttttctgggtccca 613

                                                                       
Query: 245 catcagcccgcatgggctcttctagttgtataccttgcagagggaggagacaagggggtg 304
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 612 catcagcccgcatgggctcttccagttgtataccttgcagagggaggagacaagggggtg 553

                                                                       
Query: 305 tcacttagaaaggagtgcctgggtcctctacactctctgattgttctttttctgggagca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tcacttagaaaggagtgcctgggtcctctacactctctgattgttctttttctgggagca 493

                                                                       
Query: 365 acggaaagtgtcaggggacttcctccaagcctggaaccccccccctggactccaggggta 424
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 492 acggaaagtgtcaggggacttcctccaagcctggaa--ccccccctggactccaggggta 435

                                                                       
Query: 425 ccaccgctaaggcaaagggtggatcccgtgtggggtaggatggctctttgtgttgggata 484
           ||||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 434 ccaccgctaagacaaagggtgaatcccatgt-gggtaggatggctctttgtgttgggata 376

                                                                       
Query: 485 gcctgccccttctcctgctcttctctagcccacccctcccatgctcccctgtcttcagct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcctgccccttctcctgctcttctctagcccacccctcccatgctcccctgtcttcagct 316

                                                                       
Query: 545 ctctgtttccataatctcagggacactatgcccttcagagtcctttggttttctgtacgg 604
           |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 315 ctctgtttccatcatctcagggacactatgcccttcagagtcctttgcttttctgtatgg 256

                                                              
Query: 605 ttcttccttttccattaaaccctcttgttcccctctc-cggtcttctacca 654
           ||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 255 ttcttccttttccattaaaccctcttgttcccctctctccgtcttctacca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1052
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1042
Effective search space:   671048
Effective search space used:   671048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)